Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02787 ATGGAAAACGAAATTGCAAAGCAGGAACACATGATGTTTGTTATTGAAGTTTGGCCAATGATGCCTATGTCTTCAACTATAGAGCAATCTCAGTTCCTTTGTATTAGAATGGATGAATTAGGGCACACAGGAAGCTTACCTATTCATGGGGATGCACCAGCAAAAACTGCTCTGTACAGAGATATGTTTCTGTTGTTGTCCCAGAGGATTTCTCGTCACCAGGATTTTTCGAGGCCAGCTTTTGAGTCCGAACTTTCACAATTCCGGAGTTGTGAGATATCTCCTATTCAATCACTGGTTGGGCAAAAAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGACATTTTTATTTGGAAGACCTTACTGCTTCTGTTGAAATCAATTTATCTGATGCTATATCCTTTTGTGCTTTGAAAAAACAATACAATATAACTACAGGACTCTTCATAGAGAACACCATAGTTGTGGCTGAAGGCGAGATGCTTGTAGAGGGTATTTTTAAGATTTTAACATGTGGGTTTCCACCATTAGAAGATAGAGATAAATCACTTCAAGTGGTTGCAGGGCAAGACTTTTTCGGTGGTGGTACTTTTACAAAAGAGGAAACGATCAGACTGGCAGAGATGGAGAAAAGAGCAGTCAATGACATGTTTGTCATACTATCTGAAATTTGGCTAGACAAGGAAGAGGCTTTGGGAAAGCTAGAGATTGTTCTTGATGGTTTTGAGAGTGTAGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTGTTCTAAACCATGTAACCTTGCAAATTCCGATTATTCGAGCCTAAGGTTGCAGTTTGGCAAGCTAGGGCAAATTATTGCTGCCCGTCCACGGCTAAAAGAGAACAGCCGATTTCTTTTTATTCCAGGTCCTGATGATGCAGGTCCTTCAACAGCTCTTCCTAGGTGTGCTCTACCTAAATATTTAACTGAGGAGCTTCAAAAGTATATTCCCGAAGCCATATTTTCAAGCAATCCCTGCAGGGTAAAATTCTATACCCAAGAAGTTGTATTTTTCCGCCAGGATCTGCTGTATAGAATGCGTCGTTCTTGTTTAATGCCGCCTTCTGTGACAGAAACTGCAGATCCTTTTCAGCATTTTGTTGCCACCATAACCCATCAGAGTCATCTCTGTCCACTCCCTCTAACTGTACAACCCATCATATGGAATTATGACCATTGCCTTCATTTGTATCCAACTCGGCACACGGCACTGTTAATAATAGTTTTAGGAGACAGAAGTCCGCAGAAGGCTTTCAAGTACACAGGAATCACTTGTTTTAATACCGGATCTTTCTCCGAGGATAGCACATTTGTTGCATACCGCCCTTGCTCTCAGGAAGTTGAATTGTCATCCTTGTGA 1407 0.4122 MENEIAKQEHMMFVIEVWPMMPMSSTIEQSQFLCIRMDELGHTGSLPIHGDAPAKTALYRDMFLLLSQRISRHQDFSRPAFESELSQFRSCEISPIQSLVGQKGRRWVMGVISQLEDGHFYLEDLTASVEINLSDAISFCALKKQYNITTGLFIENTIVVAEGEMLVEGIFKILTCGFPPLEDRDKSLQVVAGQDFFGGGTFTKEETIRLAEMEKRAVNDMFVILSEIWLDKEEALGKLEIVLDGFESVEVVPSLFVFMGNFCSKPCNLANSDYSSLRLQFGKLGQIIAARPRLKENSRFLFIPGPDDAGPSTALPRCALPKYLTEELQKYIPEAIFSSNPCRVKFYTQEVVFFRQDLLYRMRRSCLMPPSVTETADPFQHFVATITHQSHLCPLPLTVQPIIWNYDHCLHLYPTRHTALLIIVLGDRSPQKAFKYTGITCFNTGSFSEDSTFVAYRPCSQEVELSSL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02787 468 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 30 467 IPR016266 GO:0003677|GO:0006261|GO:0008622
Car07g02787 468 Pfam DNA polymerase alpha/epsilon subunit B 222 418 IPR007185 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02787 Car-Chr7 53485688 53500390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02787 42 430 Core DNA Replication Machinery Family AT5G22110 72.751 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02787 K02325 - qsu:112038614 696.427