Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02783 ATGGTGTCCGTGAACCCTAATAATCCAGCACAAGCCTTTTACTTCTTCGATCCTTCAAATATGGCTCTTCCCGGTGCAAACCATCTTCCGCCACCTACTAGCGCCGCCGTATCTACCACCGTCGATGATCCGAATAAGAAGATCCGAAAACCTTACACTATTACTAAATCTAGAGAGAGCTGGACTGACCAGGAGCATGAAAAGTTTCTTGAAGCTCTCCAATTATTTGATCGTGACTGGAAGAAGATTGAAGCCTTTGTGGGTTCAAAAACAGTCATCCAGATACGAAGTCATGCACAGAAGTATTTTCTAAAAGTTCAGAAGAATGGAACCAGTGAACATGTACCTCCTCCTCGGCCAAAGAGAAAAGCCGCTCACCCATATCCTCAAAAAGCTCCCAAAAATGCTCCTACTGCATCCCAAGTCATGGGGCCATTGCAATCTTCACCTGCTTTTATTGAGCCAGCATACATTTATAACACAGATTCATCATCTGTGCTTGGAACACCAGTTACTAGTGTGCCTTTATCATCTTGGAATTGTAATGCTAAACCACCAGCCAGTGTGCCACAAGTGACTAAAGATGACACGGGATGGACTGGATCTGGACAAGCTGTTCCTCTTAATTGTTGCCATAGCAGTAGTAATGAGAGCACTCACCCAGCTTTGCCAAGTAGTAAAGGGGTTAATCAAGGCAACCTGGGCAAGCCACTGAACGTCATGCCAGATTTTTCACAAGTATACAACTTCATTGGCAGTGTATTTGATCCAAATTCAACTAATCACCTACAGAGACTAAAGCAGATGGACCCAATAAATGTTGAAACGGCACTGTTGTTGATGAGAAATCTCTCCATTAATTTAACGAGTCCTGAATTTGAGGATCATAAGAAGCTACTGTCATCATATGATGCTGACTGTGAGAAGGCAAAGTTAGCTAATCCAAGCAGCAAACCCATGACTGTTAAATCTGAAAATCCCGTTCTTTCTGCATAG 996 0.4307 MVSVNPNNPAQAFYFFDPSNMALPGANHLPPPTSAAVSTTVDDPNKKIRKPYTITKSRESWTDQEHEKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAPTASQVMGPLQSSPAFIEPAYIYNTDSSSVLGTPVTSVPLSSWNCNAKPPASVPQVTKDDTGWTGSGQAVPLNCCHSSSNESTHPALPSSKGVNQGNLGKPLNVMPDFSQVYNFIGSVFDPNSTNHLQRLKQMDPINVETALLLMRNLSINLTSPEFEDHKKLLSSYDADCEKAKLANPSSKPMTVKSENPVLSA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02783 331 MobiDBLite consensus disorder prediction 107 143 - -
Car07g02783 331 SMART sant 57 105 IPR001005 -
Car07g02783 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 107 IPR017930 -
Car07g02783 331 Gene3D - 61 108 - -
Car07g02783 331 ProSiteProfiles SANT domain profile. 56 109 IPR017884 -
Car07g02783 331 Pfam Myb-like DNA-binding domain 58 103 IPR001005 -
Car07g02783 331 SUPERFAMILY Homeodomain-like 52 108 IPR009057 -
Car07g02783 331 CDD SANT 60 103 IPR001005 -
Car07g02783 331 ProSiteProfiles Myb-like domain profile. 53 103 IPR001005 -
Car07g02783 331 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 56 105 IPR006447 GO:0003677
Car07g02783 331 PANTHER SWI/SNF COMPLEX-RELATED 2 326 - -
Car07g02783 331 PANTHER MYB TRANSCRIPTION FACTOR 2 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02783 Car-Chr7 53398811 53404800 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car07g02783 Myb_DNA-binding 5.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02783 - - gmx:778090 519.62