Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02782 ATGTCACTATACGATGCTACTTTCATCGACAAACAACTTTCGAGACGAACAACAATATTCGGTCTCCGTCTCTGGGTCCTCATCGGAATCctcgtcgctttcttcatcgtcctctctctcttccttctctctctctgcttcaccttcCGCCGCCGCCATAAAACCAAACTCAACCACCGCCCTCCCGTCGTTTCCAAGGAAATCAAAGAAATCATCAACCACGCGCCACCTCTCTCCGAGATCCACGTCGACACAGTGAAGTTGGAGCTCCACAATTTcaacaacaacaacaacaaccacCCTGTCTCATACAGTGGGGAGAGCAGAGGAACTGGCAGTGTGTGTGAAACGGTGTCGTCTTTGGGAAGTGTGGTGGGTCCCGAAGTTTCGCATCTTGGGTGGGGTAGATGGTATACTTTAAGAGAACTTGAAGCTGCTACTAATGGTTTGTCTGAACACAATGTTATTGGTGAAGGTGGTTATGGAATTGTTTACAGTGGTGTTCTTCCTGATGGTACCAAAATTGCTGTTAAGAATCTTTTGAATAACAAAGGCCAAGCTGAGAGAGAATTTAAAGTTGAAGTAGAAGTAATAGGTCGTGTGCGCCACAAGAATCTTGTTAGGTTGCTTGGATACTGTGTTGAAGGGGAATACAGGATGCTTGTGTATGAATATGTTGATAATGGCAATCTGGAACAATGGCTGCATGGAGATGTTGGACCTGTAAGCCCTGTGACATGGGAAATCCGGATGAACATTATATTGGGCACGGCGAAAGGATTGGCTTATCTTCACGAGGGTCTTGAACCGAAAGTTGTCCACCGAGATGTGAAATCAAGTAACATACTCCTTGATTGCCAATGGAACCCCAAGGTTTCTGATTTTGGTCTTGCTAAGCTTCTGCATTCCGAGCACAGTTATGTCACGACTCGAGTGATGGGGACATTCGGTTATGTTGCGCCCGAGTACGCCTGCACTGGAATGTTGAATGAGAGGAGCGACGTGTATAGCTTTGGGATACTGATCATGGAAATGATCACCGGAAGAATTCCTGTCGATTATAGCAGACCACAAGGAGAGGTTAATTTGATTGAGTGGTTAAAAAATATGGTTGGAAGTCGAAAAGCTGAGGAAGTAGTCGATCCTAAGCTTTCGGAGAAGCCATCTTCAAAGGCTCTTAAACGTGCTTTGTTGGTTGCTCTTCGATGTGTTGATCCTGATGCCGCAAAGAGGCCTAAAATGGGACATGTGATTCATATGCTTGAGGTTGACGGCCTCTTATTTCGCGACGATCGAAGGATCGCCGGAGAATCTTCTCGTTCTGATCGTGATTATGTACAAGATCATAAGGGTTCAAGTTTAGACAAATATCGGATAGGCGAAGAATCTTCTCGTTCTGATCGAGATTATGTACGAGATCATAAGGGTTCAAGTTTAGATAAATATCAGATAGGCGAAGAGATCACCGTTCAAAGTGAAGATGATAGTAGTAGAAGTCACTATCAACCCACTAGGTTGAGATGA 1524 0.4239 MSLYDATFIDKQLSRRTTIFGLRLWVLIGILVAFFIVLSLFLLSLCFTFRRRHKTKLNHRPPVVSKEIKEIINHAPPLSEIHVDTVKLELHNFNNNNNNHPVSYSGESRGTGSVCETVSSLGSVVGPEVSHLGWGRWYTLRELEAATNGLSEHNVIGEGGYGIVYSGVLPDGTKIAVKNLLNNKGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGEYRMLVYEYVDNGNLEQWLHGDVGPVSPVTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDCQWNPKVSDFGLAKLLHSEHSYVTTRVMGTFGYVAPEYACTGMLNERSDVYSFGILIMEMITGRIPVDYSRPQGEVNLIEWLKNMVGSRKAEEVVDPKLSEKPSSKALKRALLVALRCVDPDAAKRPKMGHVIHMLEVDGLLFRDDRRIAGESSRSDRDYVQDHKGSSLDKYRIGEESSRSDRDYVRDHKGSSLDKYQIGEEITVQSEDDSSRSHYQPTRLR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02782 507 ProSiteProfiles Protein kinase domain profile. 150 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02782 507 PANTHER OS01G0323000 PROTEIN 1 460 - -
Car07g02782 507 Pfam Protein kinase domain 152 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02782 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Car07g02782 507 Gene3D Transferase(Phosphotransferase) domain 1 226 429 - -
Car07g02782 507 SMART serkin_6 150 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02782 507 SUPERFAMILY Protein kinase-like (PK-like) 131 423 IPR011009 -
Car07g02782 507 ProSitePatterns Protein kinases ATP-binding region signature. 156 178 IPR017441 GO:0005524
Car07g02782 507 CDD STKc_IRAK 156 422 - -
Car07g02782 507 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 460 - -
Car07g02782 507 Gene3D Phosphorylase Kinase; domain 1 131 225 - -
Car07g02782 507 MobiDBLite consensus disorder prediction 438 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02782 Car-Chr7 53390782 53393714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02782 26 423 Trihelix Transcription Factor Family AT5G38560 41.337 1.41e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Car07g02782 Pkinase 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02782 - - gmx:100777348 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03102 03 75967170 75970376 Car07g02782 07 53390782 53393714 PCT
Car03g01581 03 61509746 61513919 Car07g02782 07 53390782 53393714 PCT