Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02777 ATGGCCGCTGTTAGGTTTTCACGTGTAAGATACCTACATAGTTCAATCAAGGGTTCTTTGAATATTCAAAATGTTCAAAATTATCATTATCACCCTAATGTGGCTTTCAATCTTGCAAGAATTTCTAGTTTTTCTATAGATTTGTCGAACCGTCGTTATTCGAAAGGAGAGTTACAGTCACCTAAGTTGTTTGCTCAGAATCAGTTTAGTACCAGAAATGTCAATGGTGCATTTGATTCTAGAATTAGATTTTCTAGGTTATGTCATCAGAGAAGTGCTGTTTCTTTAGGTTCGATGACACATGTGTTGAGTTCCCGGATGTATTCGTCGTCTTTGGGTGGTAAAGGAAGTAGGGATGGTGATACTGAAGTGGCTGCTGGGTCTGGTGTGAGTGATGTGAGTGGTGGTGGCGATTCGGTTGTTTCGGGTGATTTGGTTGAGAAGATGAAAGATACATGGAAGAGTGTTGTAGAGGTAGCTTCATATGCTGGGGAAAAAGTTAAAGAAGCTTCTGATGATCTTACTCCATATGCTCAACAGTTGCTTGATTCACATCCTTATCTTAACATGGTGGTTATTCCGGTTGGGGGCACTTTAACTGCTACTCTTGTAGGTTGGTTCATCTTGCCTAGAATTTTAAGGAAATTTCATAAATATGCAATGCAAGGACCCGTTTCTCTATTTCCGGGAAGCTTGTCTTGGGGGGAGCCGGTTCCTTATGAGAAAAGCTTTTGGGGTGCTATGGAAGATCCAGTGCGATATTTAGTTACCTTCTTGGCATTCTCACAAATTGCTGTAATGGTAGCTCCAACAGCTATAGCTTCGCAATATCTTGCACCTACTTGGAGAGGTGCAGTGATACTTTCATTTGTGTGGTTTTTGCATAGATGGAAAACAAATGTTTTTGCGCGGACATTGTCGAGTCAAAGTTTACTTGGACTTGATAGGGAGAAAGTGCTTGCTCTAGACAAAATATCTTCTATTGGTCTATTTGTGATTGGTATAAtggcgatggctgaggcttgtggtgtggctgtgCAATCTATTGTAACTGTTGGTGGCATAGGAGGAGTTGCTACTGCTTTTGCTGCCAGAGATGTACTTGGCAATGTGTTCAGCGGTTTATCTATGCAGTTTTCAAAGCCCTTTTCAATTGGAGATACAATAAAAGCTGGAACGATAGAGGGCCAAGTGCTGGAAATTGGTCTTACTAGCACATCGTTGCTGAGTCCTGAGAAGTTCCCAGTCATTGTGCCGAACTCATTTTTTTCTAGCCAGGTAATTGTGAACAAGTCCCGTGCCGATTACCGTGCCATTATTACCAAAATTCCTCTGCAAATTGAGGACATAAGTAAGATTCCCCAGATATCGGATGATGTAAAAAGCATGTTAAAATCAAATGCAAAAGTTTTCTTAGGAAAAGATGTTCCCTACTGTTTCTTGTCACGTATAGAAAGTTCATATGCAGAACTGACACTTGGATACAACCTCAAGCACATGCGCAAAGATGAGTTCTACTCTGCAGAACAAGATATTCTCCTGCAAGCAGTTCAGATCATTAAAAATCATGGTGTTGCTCTTGGCAGCACATGGAATGACATGCCTTCTAAGTAA 1614 0.3978 MAAVRFSRVRYLHSSIKGSLNIQNVQNYHYHPNVAFNLARISSFSIDLSNRRYSKGELQSPKLFAQNQFSTRNVNGAFDSRIRFSRLCHQRSAVSLGSMTHVLSSRMYSSSLGGKGSRDGDTEVAAGSGVSDVSGGGDSVVSGDLVEKMKDTWKSVVEVASYAGEKVKEASDDLTPYAQQLLDSHPYLNMVVIPVGGTLTATLVGWFILPRILRKFHKYAMQGPVSLFPGSLSWGEPVPYEKSFWGAMEDPVRYLVTFLAFSQIAVMVAPTAIASQYLAPTWRGAVILSFVWFLHRWKTNVFARTLSSQSLLGLDREKVLALDKISSIGLFVIGIMAMAEACGVAVQSIVTVGGIGGVATAFAARDVLGNVFSGLSMQFSKPFSIGDTIKAGTIEGQVLEIGLTSTSLLSPEKFPVIVPNSFFSSQVIVNKSRADYRAIITKIPLQIEDISKIPQISDDVKSMLKSNAKVFLGKDVPYCFLSRIESSYAELTLGYNLKHMRKDEFYSAEQDILLQAVQIIKNHGVALGSTWNDMPSK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02777 537 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED 103 533 - -
Car07g02777 537 MobiDBLite consensus disorder prediction 111 136 - -
Car07g02777 537 Gene3D - 382 430 IPR023408 -
Car07g02777 537 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 103 533 - -
Car07g02777 537 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 281 365 IPR011014 GO:0016020
Car07g02777 537 Pfam Mechanosensitive ion channel 324 526 IPR006685 GO:0016020|GO:0055085
Car07g02777 537 SUPERFAMILY Sm-like ribonucleoproteins 366 431 IPR010920 -
Car07g02777 537 Gene3D - 282 381 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02777 146 533 Mechanosensitive Ion Channel Family AT4G00290 66.237 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02777 K22047 - gmx:100789047 768.844