Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02773 ATGGAATCTACCACCACCATAGATGAATCATTATcttcttcttcttcttcaccttcaatccaaacttcaaaatggaccaaccatgttttcttgagttttagaggtgaagacactcgccaaggtttcactgaccatctttttgcttcattagaaagaagaggtatcaaaacattcaaagatgatcatgatctcaaaaggggagaagttatatcattggaactcaacaaagccattgaagaatctatgttttctctcatcattctctcaccaaactatgcttcctcaacttggtgtttggatgagctacaaaagattgttgagtgtggaaagtgttttggtggtcaaggtgtttttccaatcttctatggtgtagatccttctcatgttaggcatcaaagtggaagctttgctaaagcatttagaaaacatgaagaaaactttagagaagatagagagaaagtgcaaaggtggaaagatgcattaagagaagttgctggttattctggttgggactCCAAGGATTGgcatgaggcaaaattgatagaaacaattgttgaaaacattcagaaaaaattgattcctaaattgaatgtttgcacagataactttattggaatggattcaaagataaaagaagtaacttcactcctaggaatgaatttaaacgatgttcgcttcgtaggcatatggggcatgggtggaataggaaagacaactattgctcgattagtctacgaagcgatcaaagatgaattcaatataagttgctttcttgcagacattagagaatcagtttccaagacaaatggcttagttaatatccaaatggaacttctttctcatcttaacataagaagcaatgatttttacaatgttcatgatggaaaaaagatattagcaaactccttaagcaacaaaaagattcttcttgttcttgatgatgtgaatgagttaagccaattggagagtttagcttggaagcaagaatggtttggtaaaggaagtagagttataatcacaactagggataagcacttattaatgacacatggagtgcatgaaacttataaggcaaaagggttagtaaaaaatgaagcacttaagctcttttgtttgaaagcatttaaacaagaccaacctaaagaagagtatttgagtttgtgtcaagaagcggttgaatacacaaaaggacttcctttggcacttgaggtattaggttcacatcttcatggaagaagtgttgaggtttggcatagtgctttagaacaaataacaagtgttcctcactccaaagttcaagatacattgaaaataagctatgacagtttacaatctatggagaaaaatttgtttctagatattgcatgtttcttcaaaggaatggacttagatgaagtaatagatatgttagaaaattgtggtgattatcctaaaattggaattgacattttggctgaaagatctttggtaagttttgataggggaggaaataagttgtggatgcatgatttgcttcaagaaatgggaaggaatattgtgtttcaagaatatccaaatgatcctggaaaacgcagtcgattatgGTCTCAAAAAGACATTGATCAAGTATTGACAAAAAATAAGggaactgataaaattcaaggcatagttctgaacttggatcaaccgtatgaagcaaaatggaacattgaagccttctccaaaataagtcacctaaggttactcaaaTTATGTGGCATAAAACTCCCCCTTGGCCTCAACTGCTTCCCTAGTTCACTAAAAGTACTTGACTGGAGAGGATTTCCTTTGAAAACCCTTCCATTCACTAATAATTTGGATGAAATTGTTGACCTCAAATTGCCTCACAGTAAAATAGAACAACTTTGGCATGCAACACAGtttcttgaaaatctgaaatccatcaacttgagcttttccaagtctctaaagcaattgcctgatttcgttggtgttccgaatcttgaatcattggtttttgaaggctgtacaagcttaactgagattcatccctcccttttaagccacaagaaacttgttcaattgaatttgaaacactgcaaaaggctcaaaacacttccatgcaaaatagaaacaacttcattgaagaatttaagtcttgctggttgctctgaattcaaacatcttcctgagTTTGATAAAAGCATGAAACATCTATCAAATCTTTCTTTATCAGATACTGCTATAACAAAACTACCATCTTCACTTGGATATCTTGTTTTCCTTAGACTTTTGGATTTAGAAAATTGCAAGAATCTTATTAGTCTTCCAGATACAATAAGTGAATTGAAGTCTCTCATAACTCTGAATGTTTCTGGCTGCTCAAAACTCCATAGCATTCCAGAAGGTTTAAAAGAAATCAACTGTTTGGAGGAACTTCTTGCAAGTGAAACTTCTATTGAAGAACTACCTTCATCTGTTTTTTATCTAGAAAACCTCAAAGTAATATCATTTTCTGGATGCAAAGGACCAGTGACTAAGACAGTGAATTCATTTTTGCTACCATTTACACATTTCTTAAGTAGTCCACAAGATCCTACTAGTTTTAGATTGCCGCATAAATTATCTCTACCTTCTTTGAAGTACTTAAATTTAAGTTACTGCAATCTATCTGAAGAATCAATCCCAAATGATTTTTTCAACTTTTCTTCTTTGATGGTTTTAAATCTCACTGGGAACAATTTTGTTAGTCCACCAAGTAGCATTTCAAAGCTACCAAAACTTGAGTATCTTAGCCTAAACTGGTGTGAAATGCTTCAGAATTTGCCAGAACTTCCCTCAAGTATGAGGACATTGGATGCATGTAATTGTGATTCACTGGAAACTTCTGAATTCAATCTTTCTAGATCATGCAATCTCATTGAATCGCCGATGAGGCAAAGACACTCGCATTTACCTGAAGTTCTGAAGAGCTATTTGGAGGTTTGCACCATTGCTTCCCTAATCTTCTCAAAATAA 2997 0.1268 MESTTTIDESLSSSSSSPSIQTSKWTNHVFLSFRGEDTRQGFTDHLFASLERRGIKTFKDDHDLKRGEVISLELNKAIEESMFSLIILSPNYASSTWCLDELQKIVECGKCFGGQGVFPIFYGVDPSHVRHQSGSFAKAFRKHEENFREDREKVQRWKDALREVAGYSGWDSKDWHEAKLIETIVENIQKKLIPKLNVCTDNFIGMDSKIKEVTSLLGMNLNDVRFVGIWGMGGIGKTTIARLVYEAIKDEFNISCFLADIRESVSKTNGLVNIQMELLSHLNIRSNDFYNVHDGKKILANSLSNKKILLVLDDVNELSQLESLAWKQEWFGKGSRVIITTRDKHLLMTHGVHETYKAKGLVKNEALKLFCLKAFKQDQPKEEYLSLCQEAVEYTKGLPLALEVLGSHLHGRSVEVWHSALEQITSVPHSKVQDTLKISYDSLQSMEKNLFLDIACFFKGMDLDEVIDMLENCGDYPKIGIDILAERSLVSFDRGGNKLWMHDLLQEMGRNIVFQEYPNDPGKRSRLWSQKDIDQVLTKNKGTDKIQGIVLNLDQPYEAKWNIEAFSKISHLRLLKLCGIKLPLGLNCFPSSLKVLDWRGFPLKTLPFTNNLDEIVDLKLPHSKIEQLWHATQFLENLKSINLSFSKSLKQLPDFVGVPNLESLVFEGCTSLTEIHPSLLSHKKLVQLNLKHCKRLKTLPCKIETTSLKNLSLAGCSEFKHLPEFDKSMKHLSNLSLSDTAITKLPSSLGYLVFLRLLDLENCKNLISLPDTISELKSLITLNVSGCSKLHSIPEGLKEINCLEELLASETSIEELPSSVFYLENLKVISFSGCKGPVTKTVNSFLLPFTHFLSSPQDPTSFRLPHKLSLPSLKYLNLSYCNLSEESIPNDFFNFSSLMVLNLTGNNFVSPPSSISKLPKLEYLSLNWCEMLQNLPELPSSMRTLDACNCDSLETSEFNLSRSCNLIESPMRQRHSHLPEVLKSYLEVCTIASLIFSK 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02773 998 Gene3D - 360 449 IPR042197 -
Car07g02773 998 Gene3D - 191 355 IPR027417 -
Car07g02773 998 ProSiteProfiles TIR domain profile. 25 192 IPR000157 GO:0007165
Car07g02773 998 Gene3D - 20 190 IPR035897 -
Car07g02773 998 Gene3D Ribonuclease Inhibitor 705 845 IPR032675 -
Car07g02773 998 PRINTS Disease resistance protein signature 395 409 - -
Car07g02773 998 PRINTS Disease resistance protein signature 226 241 - -
Car07g02773 998 PRINTS Disease resistance protein signature 774 790 - -
Car07g02773 998 PRINTS Disease resistance protein signature 302 316 - -
Car07g02773 998 PANTHER TMV RESISTANCE PROTEIN N-LIKE 756 952 - -
Car07g02773 998 Pfam TIR domain 28 194 IPR000157 GO:0007165
Car07g02773 998 Gene3D Ribonuclease Inhibitor 549 704 IPR032675 -
Car07g02773 998 Pfam Leucine Rich Repeat 616 633 IPR011713 -
Car07g02773 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 454 IPR027417 -
Car07g02773 998 SMART till_3 26 167 IPR000157 GO:0007165
Car07g02773 998 SUPERFAMILY L domain-like 514 955 - -
Car07g02773 998 Gene3D Ribonuclease Inhibitor 858 979 IPR032675 -
Car07g02773 998 MobiDBLite consensus disorder prediction 1 21 - -
Car07g02773 998 Pfam NB-ARC domain 212 446 IPR002182 GO:0043531
Car07g02773 998 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 756 952 IPR044974 GO:0006952
Car07g02773 998 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 753 IPR044974 GO:0006952
Car07g02773 998 PANTHER TMV RESISTANCE PROTEIN N-LIKE 33 753 - -
Car07g02773 998 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 170 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02773 Car-Chr7 53261402 53266535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02773 18 831 WRKY Transcription Factor Family AT4G12020 33.413 1.35e-112 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02773 - - gmx:100815486 1387.86