Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02772 ATGGGTTTTCCGGTGGGTTACGCTGAAGTATTCTTCCCAAACCTATTCCTTCACACCTTAACCCTCCTAGGACTTCTCCGAAAcctcgtattcctcctcttccacttcctcggcctctccgatttcctcGAAACCGACGTCATCTGGCCAGACACCACCGGAGCCACCGCAAGAACGCCGGAAACTTCCAAAAGCCCCTCCGTATCGGCGCTTCTGATCCAAGAGCTTCTCCCGGCGTCGAAATTCGGCGACCTCGTCGGCGTCGAAGAAGGTTGCTGTTGTGCTGTTTGTCTGTTCGAATTCTCCGAGGAGGAAGAGATCCGGTGTTTGAGGAACTGTAGACACATTTTTCATAGAAATTGTGTGGACCGTTGGATTGATCATGATCAGAAAACGTGTCCACTTTGTAGAACACCTTTTGTACCGGATGATATGATTGATGATTTTAATCAACGGCTCTGGGCTGCTTCTGGCGTTACTGATTTTTATGGATACGAAGAAGAATACGCTTCTTCTTTCTAA 522 0.4368 MGFPVGYAEVFFPNLFLHTLTLLGLLRNLVFLLFHFLGLSDFLETDVIWPDTTGATARTPETSKSPSVSALLIQELLPASKFGDLVGVEEGCCCAVCLFEFSEEEEIRCLRNCRHIFHRNCVDRWIDHDQKTCPLCRTPFVPDDMIDDFNQRLWAASGVTDFYGYEEEYASSF 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02772 173 SUPERFAMILY RING/U-box 93 143 - -
Car07g02772 173 PANTHER BRH1 RING FINGER PROTEIN 1 164 - -
Car07g02772 173 ProSiteProfiles Zinc finger RING-type profile. 94 137 IPR001841 -
Car07g02772 173 Pfam Ring finger domain 94 137 IPR001841 -
Car07g02772 173 SMART ring_2 94 136 IPR001841 -
Car07g02772 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 144 IPR013083 -
Car07g02772 173 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02772 Car-Chr7 53230899 53231865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02772 1 160 C3H Transcription Factor Family AT1G63840 47.561 1.26e-51 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02772 K16281 - gmx:100790975 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01571 03 61394379 61395536 Car07g02772 07 53230899 53231865 PCT