Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02766 ATGGGAGGTTGCTGTTGCTCTGCCAGAAAACCTCATCTACGTGGAACTCCAGTGTATTACTATTGCCCGCCAATTTTAGAAGAGCGTGAGTCTTTAACCTCTAATGATGGTACAACCGATTCACTCACTGCTGGATTGCTGTTAGGCTTGAATGTCGAAGAATCAACACCTGATACTTTCCAGCCTCCTCCTGCACCTCTGCCTTATGACGTGGTCTTGGGAGTTCCAGTCTCGACAGAATCCGAGTCAGGCAGAGACATTGTTAATGGTAATAGTTTTGAAACTTTAATTACATGTGAAGGTATTGAAGAATCTGACCTTAAAGCTCAAGCTAAATCTGCACCAATATCTCCAAGCAAGGCGGAACTGTGGAAATCAAATGAATCTCTTGCATTAGTGACAGAAGAAGAAGATGTCTGTCCGATTTGCCTTGAAGAATATGATGTCGAGAATCCTAAATCTTTTACAAAGTGTGAGCACCACTTTCACCTTGCTTGCATTCTTGAGTGGATGGAAAGAAGTGACTCTTGTCCTATATGTGATCAGGAAATGATATTTGATGAGGCACTGGACTAG 576 0.4253 MGGCCCSARKPHLRGTPVYYYCPPILEERESLTSNDGTTDSLTAGLLLGLNVEESTPDTFQPPPAPLPYDVVLGVPVSTESESGRDIVNGNSFETLITCEGIEESDLKAQAKSAPISPSKAELWKSNESLALVTEEEDVCPICLEEYDVENPKSFTKCEHHFHLACILEWMERSDSCPICDQEMIFDEALD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02766 191 SUPERFAMILY RING/U-box 132 187 - -
Car07g02766 191 ProSiteProfiles Zinc finger RING-type profile. 140 181 IPR001841 -
Car07g02766 191 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED 1 190 - -
Car07g02766 191 SMART ring_2 140 180 IPR001841 -
Car07g02766 191 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 190 - -
Car07g02766 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 187 IPR013083 -
Car07g02766 191 Pfam Ring finger domain 139 180 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02766 Car-Chr7 53128805 53133726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02766 1 191 C3H Transcription Factor Family AT4G00335 56.021 1.86e-72 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02766 - - cam:101501651 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01569 03 61369266 61371546 Car07g02766 07 53128805 53133726 PCT