Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02762 ATGCAATCCGGTGGACCTGGCCGGGCGGGGGGGCGGGTGTCGACTTCGTCGGCAGCTGCTTCGCCGTCTTCTTCGTCTTCGGCATCACAGTTAGGGTTTGAATCTTTgcagcagcaacaacagcagcagcagcatcagcaacagTTAGGTTCTAGGCAGTCATTTCAACAGCAACTGCTTAGAAAACCTGAAGGAAATGAAGCATATTTAGCTTATCAAGCAGGGCGTCAAGGTGCATTTGGGAGTAACAATTTCTCACCTCCTAATGCTATGCAACTTCCCAGATGCACAGCTCCAACCAAGATTGAAGCATATTTAGCTCAACATGGCTCCAACCAAGATGCACAGCTCAGAGGTCAAGGTAGCGAGCAGCAAATGATAAACCCTGTCCACCAAGCATACCTTCAATATGCTTTCCAGGCTGCGCAACAAAGGCCGCCTGCTATGGGAATTCATTCACAACAGCAACCTAAGATGGGAATGTTAAACCCTGCATCCGTAAAAGAGCATGAAATGCGTATGGGAAATCTGAAAATGCAGGAGATTATGTCTATGCAGGCAGCGAATCAAGCTCAAGGATCGTCTTCTAGGAATTCATCTGAACACATTGCTCGTGGAGAAAAGCAGATGGAGCAAGGACATCAGATAGCACCTGAACAGAAGAATGAAGGAAAGTCTTCAACTGTGGGACCGGGCAGTGGCCACTTAATACCTGGAAATATGACGAGACCTATTCAAGCACCAGAAGCACAGCAAGGCATTCAAAATGTTATGAACACTCAGATTGCAGTAGCTGCTCAATTGCAGGCCATGCAGGCATGGGCACGCGAAAATAATATCGATTTATCACATCCTACAAATGCAAACTTAATGGCAAAGCTCATTCCACTGATGCAGTCAAGGATGGTCTTACAACCAAAGGTCAGTGAGAGCAACATCGGTGCACAGTCATCACATGTACCTGTTTCAAAGCAGCAGGTTAATTCTCCAGCGGTTGCAAGTGAGAGCTCGGCACATGCTAATTCATCTAGCGACGTGTCTGGGCAGTCAGGTTCTTCGAAAGCCAGACAGACAGTTCCCGCCAGCCATCTTGGGTCAACAACTAATGTTGGTACAGCTGGTCACTCCGCTGACATGGCTATGCAACAATTCAGTGTTCATGGTAGAGAGTCTCAAGCTCCTCCAAGGCAACAAGTAAAAGGTGGAAATGTAATTCCATCTATGCATTCTCAGCAATCCTCTGCAACTGTTAACATAGGCGCAGACCATCCTTTGAATGCTAAAAGCTCATCTTCTGGTGCAGAACCTCCTCAAATGCAGTACATCAGGCAGTTAAACCAATCTACACCTCAGGCTGGAGGTCCAACAAAAGAAGGAGGTTCGGGAAATTATGCCAAACCTCAAGGAGCACCAGCTCAGATTCCTGATAAGCGAAGTGGATTTACCAAACAACAGCTACATGTTCTTAAAGCACAGATACTAGCATTTAGGCGGTTGAAGAAAGGAGAAGGTACTCTGCCACAAGAACTTCTTCAAGCTATCACTCCACCACCTCTTGAGATGCAGGCAAAACACTCAAACCATCCCGCGGGAGGACAAAATCAAGTCAAATTGGCTGGAAATACTGTGGCAGAACAACCACGGCATGTTGAGGCCAAAGCCAAGGAATCACAATCTACTCCTGCTGTTAATGGACTCAGTTCTTTAAAGCAGGAATCCTTTTCAAGGGATGAGAAACCTACTCCACCACCAGTTCATATCCAAGCTGTTATGCCGTCTGTATCAAAGGAACCTGCTGCTTCAACATCGTCTGCTGGAAAGGAAGAGCAAAAAACAATTGGATGCTCTTTTAAGCCAAACCAGGACAGTGAACATGGAAATAACAGTGCTCCTGTTAGAAATGAGTCGGCATTAGATCGGGGAAAAGCTATTGCACCACAAGCCTCTGTATCTGAATCAATGCAAATTACAAAACCTCCACAAGCAAACACTGTTTCTCAGCCAAAGGATGCGGGACCAACCAGAAAATATTATGGACCCCTGTTTGATTTTCCTTTCTTCACTAGGAAACATGACTCCTTTGGATCATCAATGATGGTAAACAACAGCAATAATTTATCACTGGCATATGATGTCAAAGATCTTCTTTTTGAGGAAGGCGTGGAAGTACTTAACAAGAAGCGGAAAGAAAATTTAAAGAAGATTGAAGGTTTGCTGGCTGTAAACTTAGAGAGGAAACGAATTAGGCCTGATCTTGTGTTGAGACTGCAAATTGAAGAGAAAAAGATTCGCCTTTTAGATCTTCAGGCACGATTGAGGGATGATATTGATCAACAACAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGTAAGTTTGTTAGGCTGTGTGAACGCCAGCGTATGGAACTTGCTAGACAAGTGCAGGCATCTCAGAGAGCTGCAAGAGAGAAGCAACTCAAATCTATATTTCTATGGCGTAAGAAACTTCTTGAGACACACTGGGCAATTCGTGATGCCCGTACTGCCCGCAACAGGGGGGTGGCCAAATATCATGAGAGGATGTTGCGGGAATTCTCAAAACGTAAAGATGAAGACAGAAACAAAAGGATGGAAGCCTTAAAAAACAATGATGTTGACAGATATAGGGAGATGTTGCTGGAGCAGCAGACTAGCATTCCGGGTGATGCTGCAGAGAGATATGCTGTTCTTTCATCTTTCTTATCCCAGACTGAAGAGTATCTACATAAATTAGGAAGTAAGATAACAGCTGCCAAAAATCAACAGGAAGTGGAGGAGGCATCAAAAGCAGCTGCAGCTGCTGCACGATTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCTGCTGCTGCTTGTGCCGGAGAGGAAGTGATGATTAGGAATCGTTTTCTGGAGATGAATGCTCCTAGAGACAATTCATCTGTCAACAAGTATTATAACCTCGCACATGCCGTGAATGAAATGATCATAAGACAACCGTCTCTATTACGAGCAGGAACATTGAGAGACTATCAGCTTGTTGGATTGCAATGGATGCTTTCTTTGTACAACAACAAATTAAATGGAATTTTGGCTGATGAGATGGGTCTTGGCAAAACTGTACAGGTTATGGCATTGATTGCATATTTGATGGAATTCAAAGGAAACTATGGCCCACATCTTATAATAGTCCCAAATGCCGTTATGGTTAACTGGAAGAGTGAGTTATATAAGTGGTTGCCATCTGTGTCGTGCATTTTTTATGCTGGAGGAAAGGATTATCGGACAAAATTATTTCATCAAGTTTCTGCTCTGAAATTTAATGTCCTGGTGACTACTTATGAGTTCATCATGTATGACCGGTCAAAACTTTCAAAAATTGATTGGAAGTATATCGTGATTGATGAAGCACAAAGAATGAAGGATAGAGATTCAGTTTTAGCACGTGATCTTGATAGGTACCGTTGTCAAAGACGCCTGCTTTTGACAGGAACACCGTTACAGAATGATTTGAAGGAACTCTGGTCACTTTTAAATTTACTTCTTCCTGAGGTTTTTGATAATAAGAAAGCCTTTCACGATTGGTTCTCAAAACCATTTCAAAAGGAAGGTCCTACTCAAAATGCAGAGGATGATTGGCTTGAAACAGAGAAGAAAGTCATCACAATCCATCGACTTCATCAAATTCTCGAGCCTTTCATGCTCAGGCGTCGTGTCGAAGATGTTGAAGGCTCATTACCACCAAAGGACTCTATAGTTTTAAGATGTAAAATGTCATCCGTCCAGAGTGCCATTTACGATTGGGTCAAATCAACTGGCACCCTTCGTCTTGATCCCGAGGATGAGGAACGTAAGATTCAGAAGAATCCCACCTACCAGGTGAAACAATATAAAACTTTAAACAACAGATGCATGGAGCTTCGGAAAACTTGCAATCATCCGTTGCTTAATTACCCCTTCTTCAGTGACTTATCTAAAGAATTCATTGTAAAATCTTGTGGAAAATTGTGGATCCTGGATAGGATCCTCATAAAACTTCAAAGAACTGGACATCGGGTTCTACTGTTCAGTACCATGACAAAACTTCTTGACATCTTGGAAGAATACCTGCAGTGGCGAAGACTTGTGTACAGAAGAATTGATGGGACAACTAGTTTGGAAGACCGTGAATCAGCTATAAATGACTTCAATAGCCCTGATTCAGATTGTTTCATCTTCTTGCTTAGCATCCGAGCTGCTGGTCGAGGCCTTAACCTTCAGTCCGCTGACACAGTTGTTATCTATGATCCTGATCCAAACCCTAAAAACGAGGAGCAGGCTGTTGCCAGAGCTCACCGTATTGGACAGAAAAGGCCAGTCAAGGTTATCTACATGGAAGCAGTTGTCGACAAAATCCCTAGTCATCAGAAGGAGGATGAAGTGAGAGGTGGAGGCACTGTCGATCTGGAGGATGAACTTGTAGGCAAGGATCGCTACATAGGATCCATTGAGAGCCTCATAAGGAACAATATTCAGCAATATAAGATAGATATGGCTGATGAAGTCATTAATGCTGGACGTTTCGATCAAAGAACAACACATGAAGAAAGGCGTTTGACTTTGGAGACATTATTACACGATGAAGATAGGTATCAAGAAACTCTCCATGACGTTCCATCACTGCTTGAGGTAAATCGCATGATTGCTAGGAGTGAAGAGGAAGTTGAATTGTTTGATCAAATGGATGAAGAACTGGATTGGGTTGAGGATATGACACGTTATGATCACGTGCCTAAATGGATTCGTGCCAATACAAAAGAAGTTAATGCTGCTATTGCTGCTCTATCAAAAAGACCTTCAAAGAACAATTTATTGGGTGGTAGTATTGGTATGGATCCAACTGAACTTGGTTCTGAAAGAAAAAGGGGACGGCCTAAAAAGCATGCTAATTATAAAGAGCTGGAAGATGAACATTTGGAATACTCTGAAGCAAGCTCTGAAGAAAGAAATGGATATGCAAATGAAGAAGGGGAAATAGGGGATTTTGAAGATGATGGGTATAGTGGAGCTGATGGAGCTCAGCCCGTCGATAAACATCAGCTGGAAGATGGTCTGCTTTGTGAAGGTGGATATGAATTTCCTCAATCTGTAGAAATTGCCAGAAATAATCAGGTGGTTCAACTTCAAGAAGCTGGTTCCTCTGGATCATCCTCAGACAGTCAAAAATTGACACTGATAGTATCGCCATCAATTTCCGCTCAGAAATTTGGTTCCCTGTCAGCATTAGATGCCCGGCCAGGTTCCGTTTCTAAAAGGATGACGGATGAGTTAGAGGAAGGAGAAATTGCAGTATCTGTTGATTCTCACATAGAGCATCAACAGTCTGGAAGTTGGATTCATGATCGCGATGAATGTGAGGATGAACAAGTTTTGCAGAAACCAAAGATTAAACGCAAACGTAGTCTTCGTGTCCGACCCCGTCATGCCACTGAAAAGCCTGAAGATAAATCTGGTAGTGAAATGACACCTCGTTTGTCAGTCCAAGCAGACCGTAAATATCAAGCACAGCTGAGGACTGACCTAGAATCAAAATCACACGGAGACTCCAATGCTGGCAGGAATGATCAAAACACTTCATTAAAAAATAAGCGAACTTTACCTTCAAGAAGAGTTGCCAATACATCCAAATTACATGGCTCACCAAAGTCTACTCGATTGAATAGCATACCGGCACCTTCAGAGGATGGTGGCGAACATTCCAGGGAAAGCTGGGAGGGATCCTCTGCCCATGGCTCTAGGATGACAGAAATCATCCAGAGAAGGTGCAAAAATGTAATTAGCAAGCTCCAAAGGAGAATAGACAAGGAAGGACATCAAATTGTACCTCTGTTAACAGATTTGTGGAAGAGGATTGAGAATTCTGGGTACAGTGGTGGATCTGGGAATAACCTGTTGGATCTACGAAAGATTGATCAGAGGATTGATAAATTGGAGTATAATGGAGCAACAGATCTTGTATTTGACGTGCAGTTCATGTTAAAGAGCGCGATGCATTATTATGGTTTTTCGCTTGAGGTAAGAACTGAAGCAAGGAAGGTTCATGATCTCTTTTTCGATATATTGAAAATTGCATTTCCCGACACCGACTTCCGAGAAGCAAGAAGTGCACTTTCTTTCACTGGTCCAATTTCTGCCACTACCATATCGTCTCCAAGGCAAGTTGTAGTTGGCCAAGGCAAGAGGCATAGGCTAATAAACGAGGTGGAAACAGATCCACACCCTTCACACAGACCGCTGCAACGTGGATCAGCTTCTAGTAGCGGCGATAACAGCAGGATTAGAGTCCGTGTGCCACCGAAGGAATCAAGAACCGGTTGCGGCAGCAGCGTTCGAGAGCAACCTCAGCAGCAGGATGATTCCCCTCCACTGCTCACTCATCCAGGTGAACTGGTTGTATGCAAGAAAAGAAGAAATGAGAGGGAGAAATCTTCAGTGAAACCAAGAACAGGTCCTGTTTCACCACCTATGAGAAGTCCTGGTGCATGTTCTGTCCCTAAGGATGTTAGATTAAGTCAACAGAGTCAAGGTTGGGTTGGTCAACAATCTCAACAAACAAATGGGTCAGTTGGATGGGCAAATCCTGTAAAGAGGCTAAGAACAGATTCTGGTAAGAGGAGACCAAGTCATATGTAA 6672 0.4314 MQSGGPGRAGGRVSTSSAAASPSSSSSASQLGFESLQQQQQQQQHQQQLGSRQSFQQQLLRKPEGNEAYLAYQAGRQGAFGSNNFSPPNAMQLPRCTAPTKIEAYLAQHGSNQDAQLRGQGSEQQMINPVHQAYLQYAFQAAQQRPPAMGIHSQQQPKMGMLNPASVKEHEMRMGNLKMQEIMSMQAANQAQGSSSRNSSEHIARGEKQMEQGHQIAPEQKNEGKSSTVGPGSGHLIPGNMTRPIQAPEAQQGIQNVMNTQIAVAAQLQAMQAWARENNIDLSHPTNANLMAKLIPLMQSRMVLQPKVSESNIGAQSSHVPVSKQQVNSPAVASESSAHANSSSDVSGQSGSSKARQTVPASHLGSTTNVGTAGHSADMAMQQFSVHGRESQAPPRQQVKGGNVIPSMHSQQSSATVNIGADHPLNAKSSSSGAEPPQMQYIRQLNQSTPQAGGPTKEGGSGNYAKPQGAPAQIPDKRSGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLQAITPPPLEMQAKHSNHPAGGQNQVKLAGNTVAEQPRHVEAKAKESQSTPAVNGLSSLKQESFSRDEKPTPPPVHIQAVMPSVSKEPAASTSSAGKEEQKTIGCSFKPNQDSEHGNNSAPVRNESALDRGKAIAPQASVSESMQITKPPQANTVSQPKDAGPTRKYYGPLFDFPFFTRKHDSFGSSMMVNNSNNLSLAYDVKDLLFEEGVEVLNKKRKENLKKIEGLLAVNLERKRIRPDLVLRLQIEEKKIRLLDLQARLRDDIDQQQQEIMAMPDRPYRKFVRLCERQRMELARQVQASQRAAREKQLKSIFLWRKKLLETHWAIRDARTARNRGVAKYHERMLREFSKRKDEDRNKRMEALKNNDVDRYREMLLEQQTSIPGDAAERYAVLSSFLSQTEEYLHKLGSKITAAKNQQEVEEASKAAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFLEMNAPRDNSSVNKYYNLAHAVNEMIIRQPSLLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELYKWLPSVSCIFYAGGKDYRTKLFHQVSALKFNVLVTTYEFIMYDRSKLSKIDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFHDWFSKPFQKEGPTQNAEDDWLETEKKVITIHRLHQILEPFMLRRRVEDVEGSLPPKDSIVLRCKMSSVQSAIYDWVKSTGTLRLDPEDEERKIQKNPTYQVKQYKTLNNRCMELRKTCNHPLLNYPFFSDLSKEFIVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAINDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKRPVKVIYMEAVVDKIPSHQKEDEVRGGGTVDLEDELVGKDRYIGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEDRYQETLHDVPSLLEVNRMIARSEEEVELFDQMDEELDWVEDMTRYDHVPKWIRANTKEVNAAIAALSKRPSKNNLLGGSIGMDPTELGSERKRGRPKKHANYKELEDEHLEYSEASSEERNGYANEEGEIGDFEDDGYSGADGAQPVDKHQLEDGLLCEGGYEFPQSVEIARNNQVVQLQEAGSSGSSSDSQKLTLIVSPSISAQKFGSLSALDARPGSVSKRMTDELEEGEIAVSVDSHIEHQQSGSWIHDRDECEDEQVLQKPKIKRKRSLRVRPRHATEKPEDKSGSEMTPRLSVQADRKYQAQLRTDLESKSHGDSNAGRNDQNTSLKNKRTLPSRRVANTSKLHGSPKSTRLNSIPAPSEDGGEHSRESWEGSSAHGSRMTEIIQRRCKNVISKLQRRIDKEGHQIVPLLTDLWKRIENSGYSGGSGNNLLDLRKIDQRIDKLEYNGATDLVFDVQFMLKSAMHYYGFSLEVRTEARKVHDLFFDILKIAFPDTDFREARSALSFTGPISATTISSPRQVVVGQGKRHRLINEVETDPHPSHRPLQRGSASSSGDNSRIRVRVPPKESRTGCGSSVREQPQQQDDSPPLLTHPGELVVCKKRRNEREKSSVKPRTGPVSPPMRSPGACSVPKDVRLSQQSQGWVGQQSQQTNGSVGWANPVKRLRTDSGKRRPSHM 2223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02762 2223 PANTHER ATP-DEPENDENT HELICASE BRM 28 2156 IPR031056 GO:0006338|GO:0006355|GO:0008094|GO:0040029
Car07g02762 2223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 992 1237 IPR027417 -
Car07g02762 2223 MobiDBLite consensus disorder prediction 1 57 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 2180 2204 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 186 200 - -
Car07g02762 2223 PANTHER SNF2/RAD54 HELICASE FAMILY 28 2156 - -
Car07g02762 2223 ProSiteProfiles QLQ domain profile. 480 516 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car07g02762 2223 SMART helicmild6 1364 1448 IPR001650 -
Car07g02762 2223 Pfam Helicase conserved C-terminal domain 1337 1448 IPR001650 -
Car07g02762 2223 MobiDBLite consensus disorder prediction 1628 1669 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 386 415 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 215 229 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 1863 1903 - -
Car07g02762 2223 Gene3D - 1926 2051 IPR036427 GO:0005515
Car07g02762 2223 Gene3D - 999 1246 IPR038718 -
Car07g02762 2223 MobiDBLite consensus disorder prediction 314 373 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 448 477 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 1775 1928 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 1848 1862 - -
Car07g02762 2223 SMART ultradead3 1004 1192 IPR014001 -
Car07g02762 2223 MobiDBLite consensus disorder prediction 549 633 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 1615 1689 - -
Car07g02762 2223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1241 1578 IPR027417 -
Car07g02762 2223 MobiDBLite consensus disorder prediction 2079 2223 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 2143 2159 - -
Car07g02762 2223 Pfam SNF2-related domain 1011 1314 IPR000330 GO:0005524|GO:0140658
Car07g02762 2223 SUPERFAMILY Bromodomain 1926 2037 IPR036427 GO:0005515
Car07g02762 2223 MobiDBLite consensus disorder prediction 595 633 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 2119 2135 - -
Car07g02762 2223 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1020 1184 IPR014001 -
Car07g02762 2223 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1338 1515 IPR001650 -
Car07g02762 2223 SMART QLQ_2 479 516 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car07g02762 2223 MobiDBLite consensus disorder prediction 557 571 - -
Car07g02762 2223 CDD SF2_C_SNF 1327 1458 - -
Car07g02762 2223 CDD Bromodomain 1931 2034 - -
Car07g02762 2223 SMART bromo_6 1924 2039 IPR001487 GO:0005515
Car07g02762 2223 MobiDBLite consensus disorder prediction 1787 1808 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 14 57 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 186 243 - -
Car07g02762 2223 Pfam QLQ 481 514 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car07g02762 2223 MobiDBLite consensus disorder prediction 648 670 - -
Car07g02762 2223 MobiDBLite consensus disorder prediction 646 672 - -
Car07g02762 2223 Gene3D - 1247 1457 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02762 Car-Chr7 53026701 53038846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02762 1029 1473 RAD5 or RAD16-like Gene Family AT1G02670 25.912 1.02e-28 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Car07g02762 SNF2_N 1.3e-64 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02762 - - gmx:100807104 3472.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01566 03 61309366 61320445 Car07g02762 07 53026701 53038846 PCT