Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02740 ATGGGGATTCAGTGCTCGAGACTCGTCCCGTGTTGTGTGAATTCGCAAGTTAAGGCATCTGTTCTTGAAACTCCAGATGCTGAAAATGATGATAGAAGTGAGGTCAGTAACTGGCCTACGTTCCGTGAATTTACACTTGAGCAACTTAAGAATGCAACGTCTGGTTTTGCTGTCGAGAATATTGTATCTGAGCATGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGAATCGCTGTTAAACGGTTTAATAGAAATGCTTGGCCCGATACTCGGCAGTTTTTGGAGGAAGCAAGAGCAGTCGGTCAGCTTCGTAACCAAAGGTTGTCAAACTTGCTTGGTTGTTGTTGTGAAGGAGACGAGAGGTTGCTTGTGGCAGAATATATGCCAAATGAAACACTTGCAAAACACCTTTTCCATTGGGAATCACAACCTATGAAATGGGCAATGAGACTAAGGGTTGTTCTACATCTTGCACAAGCTCTAGAGTACTGCACAGGCAAAGGGCGCGCACTCTATCACGACCTTAATGCATATAGAGTTCTCTTTGATGAGGATGGTAATCCAAGGCTTTCTACTTTTGGACTTATGAAAAATAGCAGGGATGGGAAAAGTTATAGCACAAATTTGGCATTCACCCCTCCAGAGTATCTTAGAACTGGGAGAGTAACGCCAGAAAGCGTAATATATAGCTTTGGCACTCTTTTGCTTGATCTTCTAAGTGGAAAGCATATCCCCCCGAGTCATGCCCTCGATTTGATCCGGGACAGAAATCTTCAGATGCTGACAGATTCTTGTTTGGAAGGACAGTTTTCTGACAATGATGGAACTGAGCTAGTACGCTTGGCATCTCGATGTTTACAGTATGAACCTAGAGAAAGGCCTAATCCAAAATCATTGGTGGCTGCTTTGGCGCCTCTTCAGAAAGAAACTGAGGTTCCTTCACATATATTGATGGGTATACCACATAGCACCAGTTTTGCTTCATTATCACCACTTGGTGAAGCATGTTCAAGAAAGGACTTGACTGCCATACATGAAGTTCTGGATAATATTGGTTATAAAGATGATGAAGGAGTGGCTAATGAGTTATCATTCCAGATGTGGACTGACCAAATGCAGGACACATTAAATTGTAAGAAAAAAGGCGATGCTGCTTTCCGGCAGAAAGATTTTAGAGAAGCAATTGAGTGCTACACACAGTTCATCGATGTTGGAACAATGGTTTCTCCAACCGTCTACGCACGGCGCAGTTTGTGTTATCTCATAAGCGACATGGCTCAAGAAGCACTAAATGACGCAATGCAAGCACAAGTTATTTCACCCGTATGGCACATTGCATCCTATCTTCAATCAGTTTCGCTTGCATTAGCTGGAATGGAGAATGAAGCACAAGCAGCACTTAAAGAGGGCACAACACTCGAATCGAAGCGGAATGCAACTTCGAAACAGAAGTGA 1476 0.4309 MGIQCSRLVPCCVNSQVKASVLETPDAENDDRSEVSNWPTFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDTRQFLEEARAVGQLRNQRLSNLLGCCCEGDERLLVAEYMPNETLAKHLFHWESQPMKWAMRLRVVLHLAQALEYCTGKGRALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDNDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHILMGIPHSTSFASLSPLGEACSRKDLTAIHEVLDNIGYKDDEGVANELSFQMWTDQMQDTLNCKKKGDAAFRQKDFREAIECYTQFIDVGTMVSPTVYARRSLCYLISDMAQEALNDAMQAQVISPVWHIASYLQSVSLALAGMENEAQAALKEGTTLESKRNATSKQK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02740 491 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02740 491 SUPERFAMILY TPR-like 381 481 IPR011990 GO:0005515
Car07g02740 491 PANTHER LRR RECEPTOR-LIKE KINASE 1 490 - -
Car07g02740 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Car07g02740 491 SUPERFAMILY Protein kinase-like (PK-like) 31 319 IPR011009 -
Car07g02740 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Car07g02740 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
Car07g02740 491 Gene3D Tetratricopeptide repeat domain 380 491 IPR011990 GO:0005515
Car07g02740 491 Coils Coil 456 476 - -
Car07g02740 491 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02740 Car-Chr7 52633156 52639156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02740 10 313 Glycoside Hydrolase AT3G07070 33.735 2.40e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Car07g02740 PK_Tyr_Ser-Thr 6.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02740 K14500 - gmx:100781311 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02740 07 52633156 52639156 Car07g02740 07 52633156 52639156 ECH