Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02731 ATGGGAAGGACACCTTGTTGTGACAAATTGGGGTTGAAGAAAGGTCCTTGGACAAGTGAAGAAGATGAAGTTCTTGTTAATTTTATTAAGAAAAATGGTGGTCATGGAAGCTGGCGTTCTCTCCCTAAGTTAGCAGGCCTTCTTCGATGTGGAAAGAGTTGTCGGCTAAGATGGACAAACTACCTGAGACCTGATATTAAACGCGGTCCCTTTACACCTGAGGAAGAAAAACTAGTCATACAGCTTCATGCCATCCTTGGAAATAGGTGGGCTGCAATAGCCTCTCAGCTACCAGGAAGAACTGATAATGAGATCAAGAACTTATGGAACACACACTTAAAGAAACGTCTGATAAGCATGGGAATTGACCCTCAAACCCATGAACCAATATCCTCATCACATTACTATCCAATTGACAAATCACATTCATCAATCGCCACACGCCACATGGCTCAATGGGAAAGTGCAAGACTTGAAGCAGAAGCAAGACTCTCAAAAGACTCATCTTTGTTCAACAACAAAACTACTGATTCTGATTATTTCCTTAAGATGTGGAACTCTGAAGTTGGACAATCTTTTCGCACCGTTCGTAAATCAGATTTCGACGATGATGAGGAGAAAACTAGGTGTCAAAGCTGTATGTCTCAAGAAGGGTCATCTTGTAATAATGATAACAAATGTGGATCAGTTTCTGCTACTACTACAACAGATTTGGCTTCATCAAGAAATGTGAAGGAAGAATTTGAGTGGAAAAACTACAAGTTATTTGATATATGTGGTTATGATTCATCAAGCTCTAATGATCTTGAAGATTCATCTGACACTGCATTGCAGCTCTTGTTGGATTTTCCTTCTAACAATGACATGAGCTTCTTAGAATGA 882 0.398 MGRTPCCDKLGLKKGPWTSEEDEVLVNFIKKNGGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHAILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLISMGIDPQTHEPISSSHYYPIDKSHSSIATRHMAQWESARLEAEARLSKDSSLFNNKTTDSDYFLKMWNSEVGQSFRTVRKSDFDDDEEKTRCQSCMSQEGSSCNNDNKCGSVSATTTTDLASSRNVKEEFEWKNYKLFDICGYDSSSSNDLEDSSDTALQLLLDFPSNNDMSFLE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02731 293 Gene3D - 11 68 - -
Car07g02731 293 CDD SANT 16 62 IPR001005 -
Car07g02731 293 PANTHER PROTEIN ODORANT1-LIKE 1 292 - -
Car07g02731 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Car07g02731 293 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Car07g02731 293 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Car07g02731 293 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Car07g02731 293 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Car07g02731 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Car07g02731 293 CDD SANT 70 113 IPR001005 -
Car07g02731 293 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Car07g02731 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 292 - -
Car07g02731 293 SMART sant 13 64 IPR001005 -
Car07g02731 293 SMART sant 67 115 IPR001005 -
Car07g02731 293 Gene3D - 70 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02731 Car-Chr7 52496209 52499604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02731 1 293 MYB Transcription Factor Family AT3G61250 62.706 4.28e-123 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car07g02731 Myb_DNA-binding 3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02731 K09422 - gmx:100800408 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01532 03 60874786 60876987 Car07g02731 07 52496209 52499604 PCT