Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02700 ATGCCTCGAGGGACTCTTGAAGTTGTTTTGATCAGCGCTAAAGGCCTTGAAGACAATGATTTTCTCTCTAGCATAGATCCTTATGTGATTCTCTCCTTCCGGGCTCAGGAGCACAAGAGTACTGTGCAAGAAGGTGCCGGATCCAACCCTCAATGGAATGAGACTTTTCTTTTCACTGTTTCTGACAGTGCTTCTGAGCTCAATCTAAGGATAATGGAAAAGGATAACTTTAACAATGATGATAATCTTGGAGAAGCAATAATTCCTTTAGAGGCAGTGTTTGAAGAGGGTAGCCTTGCTGAGAATGCTTACAAACTTGTGAAGGAGCAAGAATATTGTGGAGAGATTAAGGTGGCTCTCACTTTTACACCTGAGAGAAATGATGAAGAGGAGACTTGTGGTGGATGGAAAGAATCAACAAGGGACTTTTGA 432 0.4213 MPRGTLEVVLISAKGLEDNDFLSSIDPYVILSFRAQEHKSTVQEGAGSNPQWNETFLFTVSDSASELNLRIMEKDNFNNDDNLGEAIIPLEAVFEEGSLAENAYKLVKEQEYCGEIKVALTFTPERNDEEETCGGWKESTRDF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02700 143 Gene3D C2 domain 2 125 IPR035892 -
Car07g02700 143 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Car07g02700 143 PANTHER C2 DOMAIN-CONTAINING 1 143 - -
Car07g02700 143 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 143 - -
Car07g02700 143 SMART C2_3c 5 102 IPR000008 -
Car07g02700 143 Pfam C2 domain 4 105 IPR000008 -
Car07g02700 143 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02700 Car-Chr7 51974635 51976264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02700 4 94 C2H2 Transcription Factor Family AT4G21160 32.967 7.73e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02700 - - gmx:100500006 223.016