Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02692 ATGAGTTTTGGGGGTTTTGTAGAGAACAATTCAGGAGGTGGAAGTGTGAGAAACATAGCAGCAGAAATTTCTTACAACAACAACCAAAGAATGTCCTTTGGTTCTATTTCTCATCCTCGTCTTGTTACAACTCCTACTTTGGCTAAATCGATGTTCAACTCTCCTGGATTATCACTTGCACTTCAAACTAATATTGATGGGCAAGAAGATGTGAATAGATCAATGCATGAGAATTTTGAGCAAAATGGTTTGAGAAGGAGTAGAGAAGAGGAACAAAGTAGATCTGGTAGTGATAACTTGGATGGTGTTTCTGGTGATGAACAAGATGCTGATGACAAACCACCTAGAAAAAAGAGATATCACCGACACACTCCTCAACAAATACAAGAGCTTGAAGCGTTGTTTAAGGAGTGTCCTCATCCTGATGAGAAGCAACGATTGGAACTTAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTTAAGTTTTGGTTCCAAAATCGAAGAACGCAAATGAAGACTCAATTGGAAAGGCACGAGAACTCATTGCTAAGGCAAGAAAATGATAAGCTTAGAGCTGAGAATATGTCTATAAGAGATGCAATGAGGAATCCGATTTGTTCCAATTGTGGTGGACCAGCTATGATTGGTGAGATTTCACTTGAGGAACAACATCTTCGAATCGAGAATGCAAGGTTGAAGGACGAGCTAGATCGAGTTTGTGCACTTGCTGGAAAGTTTTTAGGCCGTCCGATTTCTACGTTACCAAACTCAAGTTTAGAGCTTGGTGTTGGAGGGAACAATGGTTTTAATGGAATGAACAATGTGTCTTCAACATTACCTGATTTTGGTGTTGGAATGTCTAATAACCCTTTAGCCATCGTGTCTCCTTCGACTAGACAAACAACACCTTTGGTGACTGGCTTTGATAGATCGGTTGAAAGGTCTATGTTTCTTGAACTTGCTTTGGCTGCTATGGATGAGTTGGTTAAGATGGCACAAACTAGTGAGCCTCTTTGGATTAGGAGTATTGAAGGTGGAAGGGAAATTTTGAACCATGAGGAATATATGAGGACATTCACACCTTGCATTGGTTTGAGACCTAATGGTTTTGTTTCAGAAGCTTCTAGAGAGACTGGTATGGTTATAATAAATAGCTTGGCCCTTGTTGAGACTCTCATGGACTCGAATCGATGGATAGAGATGTTTCCTTGTATCATTGCAAGAACCTCTACTACCGAAGTAATATCTAATGGAATAAATGGAACTAGAAATGGTGCACTTCAACTAATGCAAGCTGAACTTCATGTGCTATCACCTTTGGTTCCTGTTCGCGAGGTAAACTTCCTTCGGTTTTGCAAGCAGCATGCAGAAGGGGTTTGGGCTGTGGTTGATGTATCCATAGATAGCATTAGAGAGAATTCTGGAGCTCCAAGTTTTGTGAACTGTAGGAAGCTTCCTTCTGGTTGTGTTGTGCAAGATATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAACATGCAGAATATGAGGAAAACCAAGTCCACCAGTTGTACAGACCTTTGTTGAGCTCAGGTATGGGCTTTGGAGCGACACGATGGGTCGTTACCCTACAACGCCAGTGCGAGTGCCTTGCCATATTAATGTCCTCTGCTGCACCCTCTCGAGACCATTCCGCAATAACAGCAGGCGGAAGGCGCAGCATGCTGAAGCTAGCACAGCGAATGACGAACAACTTTTGTGCCGGGGAACCACCGGGGATCGTGTTGAGCGCAGCCACGTCGGTGTGGCTCCCAGTATCACCTCAAAGACTGTTTGACTTTCTGCGTGATGAGAGGCTCCGTAGTGAATGGGATATATTATCTAACGGTGGTCCCATGCAAGAAATGGCCCATATTGCCAAAGGACAAGATCATGGGAACTGTGTTTCTCTTCTCCGTGCTAGTGCGATGAATTCGAACCAGAGTAGTATGCTGATACTACAGGAAACATGCATAGACGAGGCGGGGTCGCTTGTAGTGTACGCGCCAGTTGATATTCCAGCCATGCACGTTGTAATGAACGGTGGTGATTCAGCTTACGTGGCATTATTACCTTCCGGGTTTGCCGTTGTACCTGATGGGCCTGGATCTCGTGGGCCAGAGAATGAGACCACTACAAATGGAGGTGAAACCCGTGTAAGTGGGTCCCTTCTAACAGTGGCATTTCAAATCCTTGTGAATAGTCTTCCTACGGCAAAACTCACCGTAGAGTCGGTGGAAACTGTGAACAATCTCATTTCTTGCACCGTTCAGAAGATTAAAGCTGCACTTCAATGTGAAAGTTGA 2325 0.4387 MSFGGFVENNSGGGSVRNIAAEISYNNNQRMSFGSISHPRLVTTPTLAKSMFNSPGLSLALQTNIDGQEDVNRSMHENFEQNGLRRSREEEQSRSGSDNLDGVSGDEQDADDKPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICSNCGGPAMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPISTLPNSSLELGVGGNNGFNGMNNVSSTLPDFGVGMSNNPLAIVSPSTRQTTPLVTGFDRSVERSMFLELALAAMDELVKMAQTSEPLWIRSIEGGREILNHEEYMRTFTPCIGLRPNGFVSEASRETGMVIINSLALVETLMDSNRWIEMFPCIIARTSTTEVISNGINGTRNGALQLMQAELHVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRENSGAPSFVNCRKLPSGCVVQDMPNGYSKVTWVEHAEYEENQVHQLYRPLLSSGMGFGATRWVVTLQRQCECLAILMSSAAPSRDHSAITAGGRRSMLKLAQRMTNNFCAGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCIDEAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVVPDGPGSRGPENETTTNGGETRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02692 774 CDD START_ArGLABRA2_like 314 542 - -
Car07g02692 774 Pfam Homeodomain 117 172 IPR001356 GO:0003677
Car07g02692 774 MobiDBLite consensus disorder prediction 79 124 - -
Car07g02692 774 ProSiteProfiles 'Homeobox' domain profile. 114 174 IPR001356 GO:0003677
Car07g02692 774 SUPERFAMILY Bet v1-like 312 543 - -
Car07g02692 774 ProSitePatterns 'Homeobox' domain signature. 149 172 IPR017970 GO:0000981|GO:0006355
Car07g02692 774 SUPERFAMILY Bet v1-like 583 767 - -
Car07g02692 774 SMART HOX_1 115 178 IPR001356 GO:0003677
Car07g02692 774 Gene3D - 103 190 - -
Car07g02692 774 Gene3D - 390 538 IPR023393 -
Car07g02692 774 SUPERFAMILY Homeodomain-like 102 174 IPR009057 -
Car07g02692 774 SMART START_1 319 543 IPR002913 GO:0008289
Car07g02692 774 Coils Coil 168 200 - -
Car07g02692 774 CDD homeodomain 116 174 IPR001356 GO:0003677
Car07g02692 774 ProSiteProfiles START domain profile. 310 546 IPR002913 GO:0008289
Car07g02692 774 Pfam START domain 319 543 IPR002913 GO:0008289
Car07g02692 774 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 582 771 IPR042160 -
Car07g02692 774 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 67 582 IPR042160 -
Car07g02692 774 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 582 771 - -
Car07g02692 774 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 67 582 - -
Car07g02692 774 MobiDBLite consensus disorder prediction 79 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02692 Car-Chr7 51796360 51802642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02692 1 774 Homeobox Transcription Factor Family AT3G61150 62.198 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Car07g02692 START 2.1e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02692 K09338 - gmx:100811873 1277.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02692 07 51796360 51802642 Car07g02692 07 51796360 51802642 ECH
Car07g02692 07 51796360 51802642 Car03g01495 03 60471417 60476913 ECH