Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02685 ATGGTGGAAGAAAGTGTTGTTGCTGTTGAAATTGTTGATGCATGTTCAACAGAAGAATGGTTGTTACACTCACAACAACTTGTTCCTATTGCTCTTACTAAATCAAAACAAGTACAAGGGTTCCAAGGTAGGTGGAAAATGATCATTACAAAATTGGAACAAGTTCCATCAAAGTTATCAGATTTATCTAGCCACCCTTGTTTTTCAAAGAATGCTCTTTGCAAGGAACAATTGCAGGCTGTGTCAAGAACACTAAGAGAAGCAATTGAATTAGCTGAGTTGTGTTTGAAGGAAAAGTATGAAGGTAAATTAAGAATGCAAAGTGATCTTGATGCATTAATTTGCAAACTTGATTTGAATTTAAAGGATTGTAGTTTGTTAACAAAAACTGGTGTACTTGGTGAAGCTACTTTACCATTCAATGTTTCTTTAGCTGAATCAGATATTGCAACACATAGCAATATAAAGGAACTACTTGCGCGCCTTCAAATCGGTCATTTGGAAGCGAAAAACAAAGCTTTAGAGAAATTACATGATGTTATGAAAGAAGATGAGAAGAATGTTTTAGCTGTTTTTGGTAGGAGTAATGTTTCTGCTTTGGTTCAGTTACTTACAGCAACATCTCCAAGGATAAGGGAGAAAACAGTTTGTATTATAAGCTCACTCATCGAATCGGGTAGCTGCGAAAATTGGTTAGTTTCTGAAGGCGTTCTGCCACCTCTTATAAGACTAATTGAATCAGGTAGTTCTGTTGGTAAAGAGAAAGCTATTGTTTCTCTTCAGAAGCTTTCGATGTCGGAAGACACGACTCGTGCAATCATAGGACATGGAGGGGTTCGTCCATTGATCGAGCTTTGTGAAAGTGGCGATTCTGTTTTGCAGGCTGCAGCAGCTTGTACTTTGAAGAACATTTCAGCTGTTCCTGAAGTGAGACAGGTTTTGGCTGAAGAAGGTATTGTCAAAGTTATGATCAATCTTCTTAACTATGGAATTTTGTTGGGTACTAAAGAGTATGCTGCTGAGTGTTTGCAGAATCTCACTGCAAGCAATGAGAATATGAGAAAGTCTGTTATATCAGAAGGCGGCGTTCGCAGTCTTTTGGCTTACCTCGATGGTCCGCTTCCTCAAGAATCAGCAGTCGGATCATTGAGGAACCTTGTTGGATCAGTTTCCGAGGAAACTTTGGTTTCGCTTGGATTGCTTCCTTGTTTGGTTCATATTTTGAAGTTTGGATCATTAGGCGCTCAACAAGGCGCCGCATCTGTTATATGCAAAATTTGCAGCTCAATGGAGATGAAGAAAATGTTAGGTGAAGTTGGTTGCATACCTCTATTGATCAACATGCTTGGGGCTAAAGTAAACAATGCTAGGTTGCTTGCAGCTCAAGCAATTGTGAGTTTAATGGTTTTGCCGCAAAATCGAAGGGAGATTAAGAAGGACGATAAAAGCGTCCCGAATATGGTTCAGTTGCTTGATCCAAGTCCACAGAATACTGCGAAAAAATACGCAGTTTCTTGCCTTGGATCACTTTCTTCTTGTAAGAAATGTAAGAAGTTGATGATTTCATATGGAGCTATAGGGTATTTGAAGAAGCTTGTTGAGATGGAGATTCCAGGAGCTAAAAAGTTACTTGAGAGATTGGAAAGAGGGAAATTGAGAAGCTTGTTTAGTAGAAAATAG 1680 0.3887 MVEESVVAVEIVDACSTEEWLLHSQQLVPIALTKSKQVQGFQGRWKMIITKLEQVPSKLSDLSSHPCFSKNALCKEQLQAVSRTLREAIELAELCLKEKYEGKLRMQSDLDALICKLDLNLKDCSLLTKTGVLGEATLPFNVSLAESDIATHSNIKELLARLQIGHLEAKNKALEKLHDVMKEDEKNVLAVFGRSNVSALVQLLTATSPRIREKTVCIISSLIESGSCENWLVSEGVLPPLIRLIESGSSVGKEKAIVSLQKLSMSEDTTRAIIGHGGVRPLIELCESGDSVLQAAAACTLKNISAVPEVRQVLAEEGIVKVMINLLNYGILLGTKEYAAECLQNLTASNENMRKSVISEGGVRSLLAYLDGPLPQESAVGSLRNLVGSVSEETLVSLGLLPCLVHILKFGSLGAQQGAASVICKICSSMEMKKMLGEVGCIPLLINMLGAKVNNARLLAAQAIVSLMVLPQNRREIKKDDKSVPNMVQLLDPSPQNTAKKYAVSCLGSLSSCKKCKKLMISYGAIGYLKKLVEMEIPGAKKLLERLERGKLRSLFSRK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02685 559 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 559 - -
Car07g02685 559 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 559 - -
Car07g02685 559 Pfam Armadillo/beta-catenin-like repeat 268 306 IPR000225 GO:0005515
Car07g02685 559 Gene3D - 391 541 IPR011989 -
Car07g02685 559 SMART arm_5 307 348 IPR000225 GO:0005515
Car07g02685 559 SMART arm_5 389 428 IPR000225 GO:0005515
Car07g02685 559 SMART arm_5 266 306 IPR000225 GO:0005515
Car07g02685 559 SMART arm_5 349 388 IPR000225 GO:0005515
Car07g02685 559 SMART arm_5 470 512 IPR000225 GO:0005515
Car07g02685 559 SMART arm_5 184 224 IPR000225 GO:0005515
Car07g02685 559 SMART arm_5 429 469 IPR000225 GO:0005515
Car07g02685 559 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 236 278 IPR000225 GO:0005515
Car07g02685 559 Coils Coil 164 187 - -
Car07g02685 559 Gene3D - 151 389 IPR011989 -
Car07g02685 559 SUPERFAMILY ARM repeat 154 538 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02685 Car-Chr7 51628070 51631965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02685 153 468 U-box Gene Family AT2G23140 23.975 2.70e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02685 - - gmx:100809488 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02685 07 51628070 51631965 Car07g02685 07 51628070 51631965 ECH