Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02681 ATGGGTTCAGGTACTAATTTGGTTACTACGGTTATTGGATTTGGATTGAGTGCATCTTTCATTGTATTTGTATGCTCAAGAATACTTTGTGGAAGATTTAGAGGACAACGTTTGAGATCACGAACTATATACGAAATTGAATCAAGAAATGATATTGAACGGCCAGAATATCATGGTAATACCCCTGAACCTTCATTTGTTGCTGCAATCCCCACTTTAAATTTCAATCAAGAGGCCTTCAGTACCATTGAGTGTACACAGTGTGTCATATGTTTGGGAGATTACAAAGAAAAGGAAATATTGCGCATAATACCATATTGTGGTCACACTTTTCATCTTTATTGTATTGACATGTGGCTAAGAAAACAATCCACATGTCCTGTATGTCGTTTGCCATTGCATAGTGTTTGTGAAGCAAAACATGTGAGACCTATAACATTCACCATAACACAATCTCTTAATGATACTTCAGAAGGGAACATAGGTAATGAGAGACAAGTTGAACTTAATGCAAGAGAAACAGAATCAATGCAGTGA 537 0.3631 MGSGTNLVTTVIGFGLSASFIVFVCSRILCGRFRGQRLRSRTIYEIESRNDIERPEYHGNTPEPSFVAAIPTLNFNQEAFSTIECTQCVICLGDYKEKEILRIIPYCGHTFHLYCIDMWLRKQSTCPVCRLPLHSVCEAKHVRPITFTITQSLNDTSEGNIGNERQVELNARETESMQ 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02681 178 SMART ring_2 88 129 IPR001841 -
Car07g02681 178 Pfam Ring finger domain 87 130 IPR001841 -
Car07g02681 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 136 IPR013083 -
Car07g02681 178 SUPERFAMILY RING/U-box 87 136 - -
Car07g02681 178 PANTHER OS11G0150450 PROTEIN 1 170 - -
Car07g02681 178 CDD RING-H2_EL5_like 87 130 - -
Car07g02681 178 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02681 Car-Chr7 51586657 51588884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02681 77 133 C3H Transcription Factor Family AT4G10160 56.140 1.16e-18 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02681 07 51586657 51588884 Car07g02681 07 51586657 51588884 ECH