Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02642 ATGCCATCCCGTCCGCCGCCACCACTTCCAACCGCGGCGGCCACCCTTACTCCCCACCACCACCGCCAAATGATAATCGGCGGAGGCATCGCAGCAGCACTCTTCCTCTCCGCCGTAATAATCTCCATACTCATTTTTCTCTACCGGAAACTATCCCACAACCGAACCGCACCGTTTGAACAAAGCCACAAAAGATTCTCATACACAGTACTGCGCCGTGCAACAAATTCATTctcggcttcgactcggctcggacacggcggcttcggctcAGTCCACAAAGCCACGCTACCATCAGGTGAAACAGTTGCTTTAAAAGTAATGGATTCACCCGGTTCGATTCAAGGTGAGAGAGAGTTTCATAACGAACTCTCTTTATGTTCAAATCTTCGTTCTCCTTTCATTCTTTCACTTCTCGGTTATTCGTCGGACCGGTCCGGTCGAAAGCTTGTTTTAGTTTACGAACTCATGTCGAACCGGAGTCTACAAGACGCACTATTAGACCGGAGGTGCAGTGAATTGATGTGTTGGTCGAACCGGTTCGATGTTGCGGTTTCGGTTGCTAAAGGATTAGAGTATCTTCATCATAACTGTCACCCTCCCGTGATTCACGGGGATATAAAACCTAGTAATGTTCTTTTGGATCGTGAATTTAGGGCTAAGATTGGGGATTTTGGACTTGCTAGGGTTAAGAGTTTGGAAGATTCTGGAATGGGGGTAATGGTGGAGGAGATTCAAGTTCAAGAGAAGAAAAAGAGAGAGgttgttgatgttgttgttgttgaagattgttgtagttctgtttctgttgttgAGGAATTGGAGAGTGTGGTTACTAATACTACTGTTGGATTAGGGGATCGGTCACCGAGGTCGCCGGAGAGTTGTAATGTGAGGGTTTTGGATTCCGATGCTTCGCCGGAGGTGGCAGTTGTTTCGCCGCCGGAGATGATTGGGGTTGAGAAATTGAGTGTTGTGTCTGATGGGTGTTTTGATAAGTTTAGTATTGATAGTGGAAATCAGAGGAAGAAGGGCGGTGGTGGTTCTGGGAGGGATTGGTGGTGGAAACAAGAGAATAATGGGGGAGGTTCGGAGTCAGGGAGAGTGAAGGATTATGTGATGGAGTGGATTGGGAGTGAGATAAAGAAGGAGAGACCTAAGAGTAGTGAGTGGGTTGGTTCCGGATCTTCAATTTGTTCAGGTGGTGGTGACGTGGCAGCGGTTTTGTCTAAGGTGGAGGGTaagaagaagcagaggaagaagaTGGAATGGTGGGCTTCACTTGATGAGGAGAAAGTTAAAGGGAAGAAGAATAGGAAACCAAGGGAATGGTGGAAAGAGGAGTTTTGTGAGGAGCTTTCAAAGAAGAGTAGGAAGAAAAAGAGAAGCCTTGATTGTCGTGGCGGTAATGGCGGGGAATCGTGGTGGCAAAAAGACGAGGATGTAAGCGGTTCGGCAGTGGAGAAGAAGAAAAAGAGAAAAAGTAAGAGTAGTAGAGGGAGTATTGATTGGTGGTTAGATGGTTTAAGTGGTGAACTTAGGAATAATGGAAGGAGAAATAGTCAAGATTGGGGTAATAATGGTGATATACCAAAGAGTGGTGGAATTAGTAGCACACCAAGTATGAGAGGAACAGTTTGTTACATTGCTCCTGAATATGGTGGTGGTGGACAATTATCTGAGAAATGTGATGTGTATAGTTTTGGCGTTCTACTTTTGGTTTTGGTTGCTGGTAGAAGACCACTTCAAGTAACAGCATCACCAATTTCAGAATTTGAGAGAGCAAATCTAATTTCATGGGCTAGACAATTAGCTCATAATGGGAAACTTTTGGAACTTGTTGACACTTCAATTCATTCTTTGGATAAAGAACAGGCATTGCTCTGTATCACCATTGCATTGTTGTGTCTTCAAAGATCTCCTGGTAAAAGGCCTTCCATGAAAGAGATTGTTGAAATGCTTTCTGGTGAGGCTGAACCACCCCATTTGCCCTTTGAATTCTCACCTTCACCACCCTCTAATTTCCTTTTCAAATCTAGGAAAAAAGCTAGGAAATTCTGGGTCTTTTTAAAGTTGAAGGAACATTTCTTTTACTTTCGATTGGCCACTTTTGAACGAATATATATTTGCTTATTAGTTATTAGTGCTATTTGA 2154 0.4183 MPSRPPPPLPTAAATLTPHHHRQMIIGGGIAAALFLSAVIISILIFLYRKLSHNRTAPFEQSHKRFSYTVLRRATNSFSASTRLGHGGFGSVHKATLPSGETVALKVMDSPGSIQGEREFHNELSLCSNLRSPFILSLLGYSSDRSGRKLVLVYELMSNRSLQDALLDRRCSELMCWSNRFDVAVSVAKGLEYLHHNCHPPVIHGDIKPSNVLLDREFRAKIGDFGLARVKSLEDSGMGVMVEEIQVQEKKKREVVDVVVVEDCCSSVSVVEELESVVTNTTVGLGDRSPRSPESCNVRVLDSDASPEVAVVSPPEMIGVEKLSVVSDGCFDKFSIDSGNQRKKGGGGSGRDWWWKQENNGGGSESGRVKDYVMEWIGSEIKKERPKSSEWVGSGSSICSGGGDVAAVLSKVEGKKKQRKKMEWWASLDEEKVKGKKNRKPREWWKEEFCEELSKKSRKKKRSLDCRGGNGGESWWQKDEDVSGSAVEKKKKRKSKSSRGSIDWWLDGLSGELRNNGRRNSQDWGNNGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGKLLELVDTSIHSLDKEQALLCITIALLCLQRSPGKRPSMKEIVEMLSGEAEPPHLPFEFSPSPPSNFLFKSRKKARKFWVFLKLKEHFFYFRLATFERIYICLLVISAI 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02642 717 Gene3D Phosphorylase Kinase; domain 1 43 156 - -
Car07g02642 717 MobiDBLite consensus disorder prediction 516 537 - -
Car07g02642 717 SMART serkin_6 78 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02642 717 MobiDBLite consensus disorder prediction 475 494 - -
Car07g02642 717 MobiDBLite consensus disorder prediction 341 367 - -
Car07g02642 717 Gene3D Transferase(Phosphotransferase) domain 1 510 660 - -
Car07g02642 717 Gene3D Transferase(Phosphotransferase) domain 1 157 297 - -
Car07g02642 717 ProSiteProfiles Protein kinase domain profile. 78 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02642 717 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Car07g02642 717 PANTHER OS07G0586332 PROTEIN 1 684 - -
Car07g02642 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Car07g02642 717 SUPERFAMILY Protein kinase-like (PK-like) 53 675 IPR011009 -
Car07g02642 717 PANTHER OS07G0586332 PROTEIN 1 684 IPR044576 -
Car07g02642 717 Pfam Protein kinase domain 535 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02642 717 Pfam Protein kinase domain 80 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02642 Car-Chr7 50677753 50680213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02642 532 654 Receptor kinase-like Gene Family AT3G58690 36.434 2.71e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Car07g02642 Pkinase 2.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02642 - - gmx:100814933 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02642 07 50677753 50680213 Car07g02642 07 50677753 50680213 ECH