Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02623 ATGGATCAAGTAGCACAAGGTCGTCCTCTTCCACCTCCTTTTCTTACTAGAGACCTTCATCTTCACCATCAATTCCACACCAACCACCAAGCCAACGAAGACGAACAACAAAGTGGCAATGGCAACCTTAGTCGTGGTCAGAAACGAGATCGAaacaacaacaacgacgacaacaacaCTCCGACCGGCGGAGAGGGAAAAGACGAAGGCGGGAGCGGAAGCGCCGGTGGAGGAAGTGGTGGTGAGATGGGAAGAAGACCAAGAGGAAGACCAGCAGGTTCGAAAAACAAACCAAAACCACCTATCATCATCACAAGGGACAGCGCGAACGCACTCCGATCCCACGTGATGGAAGTCGCAAACGGGTGCGACATCATGGAAAGTGTGACGGTCTTTGCACGGAGGAGGCAGCGTGGTGTCTGCATCCTCAGTGGTAGTGGTACCGTCACAAATGTGACTCTCCGTCAACCAGCATCGCCTGGTGCGGTAGTCACACTTCACGGAAGATTCGAGATATTATCTTTATCTGGTTCCTTCCTTCCGCCACCTGCTCCACCAGCAGCATCAGGATTAGCCATATATCTTGCTGGTGGACAAGGACAGGTTGTCGGCGGAAGCGTGGTGGGACCCTTATTGGCTTCCGGTCCGGTTGTTATCATGGCTGCTTCCTTTGGAAATGCTGCATATGAAAGATTGCCTTTAGAAGATGAAGAAACACCAGTGAATGTGCAAGGAAGTGGAGGATTAGGTTCACCAGGAATTGTAGGAACTcaacaacaacaacagcaacaacaacaacTTGTGCAACAAGATCCTAACACTTCATCACTATTCCATGGAGTGCCACAAAATCTACTCAATTCATGCCAATTACCAGCTGAGGGTTATTGGGGTGGAAGTGTTCGTCCTCCTTTTTAA 918 0.4728 MDQVAQGRPLPPPFLTRDLHLHHQFHTNHQANEDEQQSGNGNLSRGQKRDRNNNNDDNNTPTGGEGKDEGGSGSAGGGSGGEMGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEVANGCDIMESVTVFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEDEETPVNVQGSGGLGSPGIVGTQQQQQQQQQLVQQDPNTSSLFHGVPQNLLNSCQLPAEGYWGGSVRPPF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02623 305 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 225 IPR005175 -
Car07g02623 305 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 305 IPR014476 GO:0003680
Car07g02623 305 PIRSF ESCAROLA 15 304 IPR014476 GO:0003680
Car07g02623 305 ProSiteProfiles PPC domain profile profile. 109 247 IPR005175 -
Car07g02623 305 MobiDBLite consensus disorder prediction 238 274 - -
Car07g02623 305 CDD DUF296 113 180 IPR005175 -
Car07g02623 305 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 5 305 - -
Car07g02623 305 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 241 - -
Car07g02623 305 MobiDBLite consensus disorder prediction 251 274 - -
Car07g02623 305 Gene3D - 112 244 - -
Car07g02623 305 MobiDBLite consensus disorder prediction 1 103 - -
Car07g02623 305 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02623 Car-Chr7 50366450 50368077 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02623 1 305 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 62.614 1.16e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02623 - - gmx:100816243 392.504