Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02620 ATGAGTATAAACTCtagttgtagcggtagcggtggtggttgtggtggtggAAATAGCGGCGCATGTGGTCCGTGTGGCGCGTGCAAGTTCTTGAGAAGAAAGTGTTTGTCGGGTTGTATTTTTGCGCCTTACTTCGATTCGGAGCAAGGCGCTTCACATTTTGCGGCGGTTCATAAGGTTTTTGGAGCTAGCAACGTTTCGAAGTTGCTCCAAAATGTTCCGGTGCACAAGCGTCTTGACGCGGTAATCACCATTTGTTATGAAGCTCAAGCAAGAATGAGAGATCCAGTTTATGGTTGTGTTGCTCATATCTTTACTCTTCAGCAACAGGTAGTGAGTTTACAAGCAGAACTCTCCTACTTACAAGGCCACATAGCAACATATGAAGTACCCCAACCACCAAAAACTTCACCACCACAAGCAACCATAGCACCTTCAATGGTCTCACTAGCCAATCTCCCATTAGCATCTTCTTCATCCATTAATCCAGCAACATATGACTTGTCTTCACTTTTTGATCCAATGGCCCAAACTTCTTCATGGGCCATGCATCAGAGGCCCAATGGTCAATATTTTGGTAGTGGCACATCAACAAGTAACAATAGTGGTGGTGATCTTCAATCATTGGCAAGAGAGCTTTTGCTTAGATATGGATCTTCTAATGACCCATCATCTAATTCTCTTTCCAAATGA 693 0.4113 MSINSSCSGSGGGCGGGNSGACGPCGACKFLRRKCLSGCIFAPYFDSEQGASHFAAVHKVFGASNVSKLLQNVPVHKRLDAVITICYEAQARMRDPVYGCVAHIFTLQQQVVSLQAELSYLQGHIATYEVPQPPKTSPPQATIAPSMVSLANLPLASSSSINPATYDLSSLFDPMAQTSSWAMHQRPNGQYFGSGTSTSNNSGGDLQSLARELLLRYGSSNDPSSNSLSK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02620 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 5 217 - -
Car07g02620 230 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
Car07g02620 230 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Car07g02620 230 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02620 Car-Chr7 50271888 50276770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02620 27 214 AS2 family AT4G00220 62.105 7.49e-78 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car07g02620 LOB 1.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02620 K21994 - gmx:100798425 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01460 03 60029435 60033788 Car07g02620 07 50271888 50276770 PCT