Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02615 ATGGAAGGAAGAGAAGGTATCAATTCCGGGGTTACCGTGATAGGTGCAGAAGCTCCATCGGCTTATCATGTAGCACCAAGGAGTGAAGCTCCAAACTCGGTTCATAACCCCGAAGCAGCAGTTGTGGCTGCTGGTGCTGCTACTGTTGGTGTCTCACCGGTGAGTGTAGGTTTGGATGGAACAACAGCAGTTAAGAAGAAAAGGGGTAGGCCGAGGAAATATGGTCCAGATGGATCTGTCAATATGGCATTGTCGCCATTGCCTATCTCATCATCAGCTCCACCTAGTCATGACTTCGCATCCGTGAAGCGAGGGAGACCACATGGGATGGAATATAAGAAGGCGAAAAAAGTTGTGATGGATCATCTGGGTGAAATGAATGGATACTCTGATGGTACACACTTTATGCCGCATTTCATCACTGTCAATGCCGGCGAGGATATTACAAATAAAGTAATATCATTTTCTCAGCAAGGTCCCCGAGCTATATGCATATTATCTGCTACGGGTGTAATTTCAAATGTTACACTCCGTCATCCAGATTCTTCTGGCGGTACTCTGACCTATGAGGGTCGTTTTGAGATTCTTTCCTTGTCTGGATCATTCATGCCTACTGAAAACCAAGGAACACGAAGCAGGTCAGGTGGAATGAGTGTCTCGCTGGCTAGCCCTGATGGTCGTGTTGTAGGCGGTGGAGTCGCTGGTCTTCTTATAGCTGCTAGTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAGCGGCCATCAAGATCAGAAAGTAAAGAAGCCGAAATCCGATTATGCAGCAGCCACATTTACTCAAGCTATTGCCGTATCCTCAGCACCACCACACCAAACTAACAATGCTGAAAAAGAAGATGTCATTGGTGGACATCATGTACTGCAAAATTCCGGAACCCTTAACTCGAGTTTCACTTCTCCTCCTCCACACACCACCTTTCGAAGAGACAACTGGGTCAACATGCACTCGATGCCTGACTCAAGAAAGTCAGCTACTGATATAAACATATCTTTGCCTGATAGTTAA 1047 0.4661 MEGREGINSGVTVIGAEAPSAYHVAPRSEAPNSVHNPEAAVVAAGAATVGVSPVSVGLDGTTAVKKKRGRPRKYGPDGSVNMALSPLPISSSAPPSHDFASVKRGRPHGMEYKKAKKVVMDHLGEMNGYSDGTHFMPHFITVNAGEDITNKVISFSQQGPRAICILSATGVISNVTLRHPDSSGGTLTYEGRFEILSLSGSFMPTENQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPSGHQDQKVKKPKSDYAAATFTQAIAVSSAPPHQTNNAEKEDVIGGHHVLQNSGTLNSSFTSPPPHTTFRRDNWVNMHSMPDSRKSATDINISLPDS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02615 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 250 IPR005175 -
Car07g02615 348 CDD DUF296 137 250 IPR005175 -
Car07g02615 348 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 347 - -
Car07g02615 348 Gene3D - 137 274 - -
Car07g02615 348 ProSiteProfiles PPC domain profile profile. 132 273 IPR005175 -
Car07g02615 348 SUPERFAMILY AF0104/ALDC/Ptd012-like 135 254 - -
Car07g02615 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 347 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02615 Car-Chr7 50085028 50090071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02615 6 286 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.844 3.40e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02615 - - gmx:100793726 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02615 07 50085028 50090071 Car07g02615 07 50085028 50090071 ECH
Car03g01457 03 59987171 59991120 Car07g02615 07 50085028 50090071 PCT