Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02603 ATGAAGTCTCTGCAAACCTTTTATTTGATTTTAATATTTCTTCTCCTTGCATTTGATGTTTGTGAATCCAATGATTGTAGCTATCCCGTCAACACCATAACTAATACATACAACACCCCAGTGTTATTAGAGGTCAAAAATATCACACAAGCCAAAGCTGTTCGAATCCATGCAGATAAATGTGCTTTCTTTGATTGCGGTTTTCTAGGGGTGCAAGACACTTTAAATGATGATTCTGGTCGTCATTATTACCATAATTGTTACATCCAAGGTGGAGCCGATTTCATATATGGGAATGGTCAATCTATCTTTGAGGCATGTACAATATTTTTTTCAATGGGAAAATATGGTCCCAAATTTGATGGGGTTATTACAGCACAAGAAAGGGAATCACCAAATGAAACAACTGGGTTTGTGTTTAAAAATTGTAACATAAGTGGAACAGGATCAAAGACTCGACTTGGAAGGGCTTTGACTGCATATGCAAGAGTCATTATAGCTGATTCATACCTTTCAGATGTGGTTAGACCTGAGGGTTGGAATCAACGAAGCTATGTTGGCCAGGAAGCCAACATTACTTTTGTGGAGGAGGGATGTAGAGGACCTGGAGCAAATAAATCAAAGCGTGTACCATGGATGAAGAATTTGAGTGGACCTCAACTTGACCAATTCCTAAATATCTCTTATATTGATGAAGAAGGGTGGATAGCCAAATTGCCAACAACGATATAA 732 0.3811 MKSLQTFYLILIFLLLAFDVCESNDCSYPVNTITNTYNTPVLLEVKNITQAKAVRIHADKCAFFDCGFLGVQDTLNDDSGRHYYHNCYIQGGADFIYGNGQSIFEACTIFFSMGKYGPKFDGVITAQERESPNETTGFVFKNCNISGTGSKTRLGRALTAYARVIIADSYLSDVVRPEGWNQRSYVGQEANITFVEEGCRGPGANKSKRVPWMKNLSGPQLDQFLNISYIDEEGWIAKLPTTI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02603 243 Gene3D - 19 243 IPR012334 -
Car07g02603 243 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 41 242 - -
Car07g02603 243 PANTHER PECTINESTERASE 41 242 - -
Car07g02603 243 SUPERFAMILY Pectin lyase-like 32 239 IPR011050 -
Car07g02603 243 Pfam Pectinesterase 49 214 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02603 Car-Chr7 49816328 49817914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02603 50 236 Carbohydrate Esterase AT1G05310 44.211 5.96e-54 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02603 - - cam:101494460 419.853