Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02600 ATGGCTAAAGATCGTAAACATGATTACAATTATGAAGAAACCTATGAAAAATATGAAAAGAAGATGAAAAGATCTTTTTCAGTGTCTAGTGATCATGAAGATGATGCTAAGAGGATGAATGGTAAGGTTTCTATTCAAGAGTTAACACACAAGTGCAATATTTGTGGAAAAACTTTTAGCAACGGAAAAGCATTAGGTGGTCATAGAAGATCTCACTTTCAAGCTGCAAAGAAGAAACCTAATTCACAAAAGGAACCAACTTGTTATCTATGCAAGAAGAAATTTCCATCAAAGAATGCTTTGTATGGTCACATGAGATCTCACCCTTTTAGGGTTTGTAAAGGTGTTAGTCCTCCTTCAAATCACaattcttcttcaaacagcaattctaattctaattctTCTAGTCAACAAAATAAAGAAGATCAAGATGATGATGGTGATTGTTCTTTGCCAAAGTGGCAAAAGAGAGATAAAAGAGGTAGAAAATGTATTGGTAGTGCTGAGGCTGCTAACAATCTTGTGCACCTTCGTTCAAATGTTGTTAATATGTCTATTAATGTGCCAAAGAGTGTTGATGAATTTCCAATTCCAAGTAAGAAAGGTGAATCATCAACAATTGTGGTCAACAAGATTAAATTCTTTTTTGGTAGTTCATTGAAGATTGGAAATCAAAGTGATATTGGGAATGGTGGTGAGAGTCACAACATTGATAAGGAGCTAAAGAAAGGCAATGGAAATGGTTTAGTATCTGAATCTAGGGTTGATGAGAATACAAATGATGGTCATTCTGCAGAACAAAAAAAATTGGAGTTTGATTTGAATGAGCCATATGTTAGGGAGGATTAA 849 0.331 MAKDRKHDYNYEETYEKYEKKMKRSFSVSSDHEDDAKRMNGKVSIQELTHKCNICGKTFSNGKALGGHRRSHFQAAKKKPNSQKEPTCYLCKKKFPSKNALYGHMRSHPFRVCKGVSPPSNHNSSSNSNSNSNSSSQQNKEDQDDDGDCSLPKWQKRDKRGRKCIGSAEAANNLVHLRSNVVNMSINVPKSVDEFPIPSKKGESSTIVVNKIKFFFGSSLKIGNQSDIGNGGESHNIDKELKKGNGNGLVSESRVDENTNDGHSAEQKKLEFDLNEPYVRED 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02600 282 MobiDBLite consensus disorder prediction 112 155 - -
Car07g02600 282 Pfam C2H2-type zinc finger 50 72 - -
Car07g02600 282 Gene3D Classic Zinc Finger 48 108 - -
Car07g02600 282 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
Car07g02600 282 SMART c2h2final6 86 108 IPR013087 -
Car07g02600 282 SMART c2h2final6 50 72 IPR013087 -
Car07g02600 282 MobiDBLite consensus disorder prediction 139 155 - -
Car07g02600 282 SUPERFAMILY beta-beta-alpha zinc fingers 50 108 IPR036236 -
Car07g02600 282 MobiDBLite consensus disorder prediction 22 42 - -
Car07g02600 282 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 72 IPR013087 -
Car07g02600 282 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 11 79 IPR044653 GO:0003700
Car07g02600 282 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 83 166 IPR044653 GO:0003700
Car07g02600 282 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 108 IPR013087 -
Car07g02600 282 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Car07g02600 282 PANTHER ZINC FINGER PROTEIN ZAT4-LIKE 83 166 - -
Car07g02600 282 PANTHER ZINC FINGER PROTEIN ZAT4-LIKE 11 79 - -
Car07g02600 282 Pfam C2H2-type zinc finger 87 108 - -
Car07g02600 282 MobiDBLite consensus disorder prediction 256 282 - -
Car07g02600 282 MobiDBLite consensus disorder prediction 227 282 - -
Car07g02600 282 MobiDBLite consensus disorder prediction 22 41 - -
Car07g02600 282 MobiDBLite consensus disorder prediction 117 138 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02600 50 119 C2H2 Transcription Factor Family AT2G26940 32.692 1.69e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car07g02600 zf-C2H2_6 7.1e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02600 - - cam:101497250 518.079