Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02597 ATGGCTCACAAGATTACTAAAAAAGAAGAAACAGAATTCAAGGTTCCCGAAACCATCACACCATCACCATGCATCAACATTCAAACCGCCGCAACAACCACCGTAACTGCCGCAACAACCACCGTAACTGCCGCAACAACAACCACCTCGATTTCAGAACCTTCTAGATTTTTTGAAGATAAATCAACAGCCAGATCCGCCACGTCATCACGCTCCCCAAAGAGATCTCACCCTAGCGACGATGATACGCAAGTTCAACCTCAAACGACGTCGTCAGAAGCCAAACGCGCCGTTAATCGCTGCTCCGGTTGTCGAAGGAGAGTTGGTCTTACCGGATTCCGTTGCCGTTGCGGCGATCTTTTCTGTTCCGAGCACCGATACTCCGATCGCCATGACTGTTCTTATGATTACAAAACCGTCGGAAGGGAAGCAATCGCTAGAGAAAATCCTGTTGTCAGAGCGGCGAAGATCGTTAAGCTCTGA 483 0.4886 MAHKITKKEETEFKVPETITPSPCINIQTAATTTVTAATTTVTAATTTTSISEPSRFFEDKSTARSATSSRSPKRSHPSDDDTQVQPQTTSSEAKRAVNRCSGCRRRVGLTGFRCRCGDLFCSEHRYSDRHDCSYDYKTVGREAIARENPVVRAAKIVKL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02597 160 MobiDBLite consensus disorder prediction 50 97 - -
Car07g02597 160 MobiDBLite consensus disorder prediction 82 97 - -
Car07g02597 160 SMART AN1_Zf_4 101 138 IPR000058 GO:0008270
Car07g02597 160 PANTHER AN1-LIKE ZINC FINGER PROTEIN 1 159 - -
Car07g02597 160 MobiDBLite consensus disorder prediction 50 73 - -
Car07g02597 160 SUPERFAMILY AN1-like Zinc finger 84 154 IPR035896 -
Car07g02597 160 Gene3D - 69 156 IPR035896 -
Car07g02597 160 ProSiteProfiles Zinc finger AN1-type profile. 95 141 IPR000058 GO:0008270
Car07g02597 160 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 159 - -
Car07g02597 160 Pfam AN1-like Zinc finger 101 138 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02597 Car-Chr7 49635247 49636814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02597 89 160 C2H2 Transcription Factor Family AT3G52800 56.944 2.05e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02597 - - lja:Lj3g3v0478150.1 207.994