Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02593 ATGACAGATCCTCAATCTAACTTTTTTGATGAATGGTACAACTTCATGCTCCTCAATCCTCACtcttcttcttcttcttcttcttcAAATCAAACCAACATGTTATCATCATCCTCTAATTACCCTTTTCTTCATAACTCAAACAACATGTATCAAATTCAATTTCAGCATCAAGCCTCATCTTCTACCCTAAACCCTCCTTCTCCTCCTCTTAGAGAAGCCCTTCCTCTTATTAACAAATTAAGCCTAAAAAATCACCAACAAGAAAATCATGAACCCTCAAACATTAATAGTACTACTACATTAgaagaggaagaagatgatcatgatcatgatgatattaatgatgatgaAAGTGTTACTGTTGCCCTACAAATAGGGCTTCCTAGAATGAGTAATAGTTCTTGTGATCTTGGTTCAAGGATGGTCTCAAATTGTATAGAAATGGCTGAAAAAGAAGAACTTAATATGGTTTCTGAACACCCTTTGGAAAGATTGAACAAGGGTCAGTATTGGATTCCAACCCCTTCTCAAATTCTCATTGGTCCTACTCAATTCTCATGTCCTGTGTGTTCTAAAACTTTCAACAGATACAACAATCTTCAGATGCATATGTGGGGACATGGATCTCAATACAGAAAGGGGCCTGATTCACTAAAAGGAACACAACCAACAGCTATGTTAAGGCTACCATGTTTTTGTTGTGCACAAGGTTGCAAACACAACATTGATCACCCTAGAGCAAAGCCTCTCAAAGATTTTAGAACTCTTCAAACACATTATAAGAGAAAGCATGGTATAAAACCTTACATGTGTAGAAAATGTGGAAAATCATTTGCAGTGAAAGGTGATTGGAGAACACATGAAAAGAATTGTGGAAAAATTTGGTATTGTTTATGTGGATCAGATTTCAAACATAAAAGGTCTTTAAAAGATCATATTAAAGCCTTTGGTTATGGTCATGGTGCTTTTGGTATTGATTGTTTGCAAGAAGAAGATGAAGTAGGTTCAGAAATTGAACATGATGGTGGAAGTTCCGTGTGA 1044 0.3381 MTDPQSNFFDEWYNFMLLNPHSSSSSSSSNQTNMLSSSSNYPFLHNSNNMYQIQFQHQASSSTLNPPSPPLREALPLINKLSLKNHQQENHEPSNINSTTTLEEEEDDHDHDDINDDESVTVALQIGLPRMSNSSCDLGSRMVSNCIEMAEKEELNMVSEHPLERLNKGQYWIPTPSQILIGPTQFSCPVCSKTFNRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPCFCCAQGCKHNIDHPRAKPLKDFRTLQTHYKRKHGIKPYMCRKCGKSFAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHIKAFGYGHGAFGIDCLQEEDEVGSEIEHDGGSSV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02593 347 MobiDBLite consensus disorder prediction 84 100 - -
Car07g02593 347 Gene3D Classic Zinc Finger 246 320 - -
Car07g02593 347 PANTHER ZINC FINGER PROTEIN WIP2 1 345 IPR043584 GO:0003700|GO:0010468
Car07g02593 347 MobiDBLite consensus disorder prediction 21 40 - -
Car07g02593 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 270 290 IPR013087 -
Car07g02593 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 186 213 IPR013087 -
Car07g02593 347 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 1 345 - -
Car07g02593 347 Pfam Zinc finger, C2H2 type 186 205 IPR013087 -
Car07g02593 347 ProSitePatterns Zinc finger C2H2 type domain signature. 188 208 IPR013087 -
Car07g02593 347 Gene3D Classic Zinc Finger 185 208 - -
Car07g02593 347 MobiDBLite consensus disorder prediction 84 114 - -
Car07g02593 347 SMART c2h2final6 270 290 IPR013087 -
Car07g02593 347 SMART c2h2final6 186 208 IPR013087 -
Car07g02593 347 SUPERFAMILY beta-beta-alpha zinc fingers 186 290 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02593 Car-Chr7 49540745 49544391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02593 1 340 C2H2 Transcription Factor Family AT3G57670 54.354 1.04e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car07g02593 zf-C2H2_6 9.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02593 - - gmx:100794446 530.02