Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02590 ATGTTAGTGCATTTATTTGTTATCAAGTGCAAAGAAAAAGTAAAAGAGAACCAAATCTGTGGTGGTGTGGTTGGTTTCTGCTACTCCAACCATTTTCTGAATGAGAACAATAACAAGGTGTTACTTTTGAAAGGGTATAGTGATTTTTATTTGAGAAATTGCAAGATGAATGATGGTAGACAAATGGGGGTGCATTACATGGATGGTGGTGGATTTCCTTATGGTGTTAATGAAAGCTTTGTGGATTTCTTTCAAGGCATTAATCATGTTCCTGTCAATTATGCCTTTCCTGGCTCAATGCCTGATCAGGATGGTGTCTACTGGTCAATGAACATGAATCCCTATAAGTTTGGAATGTCTGGCCCTGGAAGTACATCTTATTATAGTTCTTATGAGGTAAACGATCATTTGCCGAGAATGGAGAACAATCGGGCCGAGTGGGAATACCCTTCTGAAATGATCTCGGAGGAACCGGCTACATCAGATTCTCCACTTAGAAGAGATGGAGTTAGCATGCAGACTATCCCCGAAGAATGTAGTCCGAATCATCATGAGTCCAGTAGTAGTAGCCAGGTTATATGGCAAGACAATATTGATCCTGACAATATGACTTATGAGGAACTATTGGACCTAGGGGAGGCAGTTGGAACTCAAAGCCGAGGTCTTTCACAAGAACTTATCGATATGCTTCCGACCTCGAAGTACAAATTTGGTAGCTTATTCAAAAGAAAAAATTCCGGGAAAAGGTGTGTAATTTGCCAGATGACATATAGAAGAGGTGACCAGCAAATGAAATTGCCATGCAGTCATGTTTATCATGGTGAATGCATTACCAAATGGCTTAGCATTAACAAGAAATGTCCGGTTTGCAACACTGAGGTTTTTGGCGAGGAATCAACGCAGTAG 906 0.4051 MLVHLFVIKCKEKVKENQICGGVVGFCYSNHFLNENNNKVLLLKGYSDFYLRNCKMNDGRQMGVHYMDGGGFPYGVNESFVDFFQGINHVPVNYAFPGSMPDQDGVYWSMNMNPYKFGMSGPGSTSYYSSYEVNDHLPRMENNRAEWEYPSEMISEEPATSDSPLRRDGVSMQTIPEECSPNHHESSSSSQVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFGSLFKRKNSGKRCVICQMTYRRGDQQMKLPCSHVYHGECITKWLSINKKCPVCNTEVFGEESTQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02590 301 ProSiteProfiles Zinc finger RING-type profile. 250 291 IPR001841 -
Car07g02590 301 Pfam Ring finger domain 249 291 IPR001841 -
Car07g02590 301 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 56 300 IPR033276 GO:0004842|GO:0016567|GO:0046621
Car07g02590 301 SUPERFAMILY RING/U-box 249 295 - -
Car07g02590 301 SMART ring_2 250 290 IPR001841 -
Car07g02590 301 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BIG BROTHER 56 300 - -
Car07g02590 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 212 295 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02590 Car-Chr7 49443097 49450754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02590 64 299 C3H Transcription Factor Family AT3G63530 55.042 7.12e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02590 K19045 - gmx:100792734 422.165