Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02572 ATGTTAGCATCATCTCAACATTTTCTATCATCCTTTTCTATCCTCCTGGTCATTTTGTTGGCCTTTTTCACTTGTACTATTTCTTCAAGTTTCATTCCAAAAGATAGTTTTCTTATTGATTGTGGTTCTGAAAATGTAGTCACTTTACCTGATGGAAGAACATTCAAATCTGATCCTCAAGCTAACTCATTTTTACAAGCTAATGATGATTACAAAGTTTCATCAAATGATAATAGTGTTAATCTTCCTTCACCTATTTATTCAAATGCAAGAATCTTCATTCAAGAAGCTAAATATTCTTTTCATTTAGTTCAACCTGGTTTTCATTGGATTCGTCTTCATTTCTATCCAATCAAAAACAATGTCTTTGATCTTCAAAAAGCAACTTTTTCTGTCAATACAGAAACTTTTGTTCTTCTTCATAGTTTCAATGTTAATAATACTGATAAACCAATCCTCAAAGAGTATCTCATCAATGCAACAGAACCACAGTTAACAATATCCTTCATTCCTTTGAAGAATTCGGCCGCATTTATCAATGCGATCGAGGTTGTTTCCGCTCCTGATAACTTTCTATTCGATAGCGGGTCGGGACTATTTCCGGTCGCTGATGTGACTGGTCTAACAACATATGCTTTCCAGCCTGTTTATAGGTTGAACAATGGAGGACCATTGATTACTTCATCAAATGATACACTTGGTAGAGTTTGGGAATCTGATGAAAATTTTTTGACTAATAAGAATTTGGCTAAGAGTGTTTCTGTTGCTACTAATGCTATTAAGTTTCCTTCTGATATGCCGACGATATCGCCTTTAATTGCGCCACAAACTGTTTATGCTTCTGCAACTGAAATGGGGGATGCTGGTGTTAACATGCCAAATTTCAATGTGTCATGGAAATTTGATGTTGACACAAGTTTTAGTTATCTTTTAAGATTGCATTTTTGTGACATTGTGAGTAAAGGGCTTAACCAACTTTACTTTAATGTTTATGTGAATGGAAAAATTGCAATTCCTAATTTGGACTTATCAGCTATTAATGGTGCATTATCAACACCATATTATAAAGATATTGTTGTTAATGCAACATTGATGACACAAGGATTAACTGTTCAAGTTGGTCCTGCAAATGCTGATGGTGGAAATGCTAATGCAATTTTGAATGGTATTGAGGTTTTGAAGATAAGTAATACTGTTAACAGTTTGGATGGTGAGTTTGGTGTGGATGGAAGGAGAGTTGGTGGATCGAACCGCGGCACGGTGGCAGCGGTTGGATTTGCAATGATGTTTGGTGCATTTGTTGGTCTTGGTGCTATGGTGATTAAGTGGCATAAGAGGCCACAAGATTGGCAAAAGAGGAATAGTTTCTCTTCTTGGTTGTTGCCTTTACATGCTGGTGATACAAGTTTCATGAGTAGTAAGACTTCAATGGGAAAAAGCAATGTTTTCTCATCCTCAATGGGATTAGGAAGGATATTTTCATTTGCTGAGATACAAGAAGCTACTAAGAATTTTGACTCAAAAAATATTATTGGTGTTGGTGGATTTGGTAATGTTTATTTAGGTGTGATTGATGAAGGGACACAAGTTGCTGTTAAGAGAGGAAATCCACAATCAGAACAAGGGATTAATGAATTCCAAACTGAGATACAAATGTTGTCTAAGCTTAGACATAGGCATTTGGTTTCAATGATTGGTTATTGTGATGAAAATGAAGAAATGATTTTGGTTTATGAGTATATGCCTAATGGTCATATGAGAGACCATCTTTATGGTAAGAACATGCCACCTCTTTCTTGGAAGCAAAGGTTGGAGATATGCATCGGATCAGCGAGAGGTCTACATTATCTTCACACAGGAACGGCGCAAGGAATCATTCATCGCGATGTCAAGACGACAAATATTTTGCTTGATGAGAATTTCACTGCAAAGGTTTCTGATTTTGGACTTTCTAAGGACGCACCTATGGGACAAGGTCATGTTAGTACGGCTGTGAAGGGTAGTTTTGGTTATCTTGATCCAGAGTATTTTAGGAGACAACAGTTGACTGAAAAGTCTGATGTTTACTCTTTCGGAGTAGTCCTGTTGGAGGCATTGTGTGCAAGGCCGGCTATCAACCCTCAGTTACCTAGAGAACAAGTTAACTTGGCTGATTGGGCTATGCAATGGAAAAGAAAGGGTTTGCTTGATAAAATTATTGACCCTCTTCTTATCGGTTCGATTAACCCCGAATCGATGAAGAAGTTTGCTGAGGCCGCCGAGAAGTGTTTGGCGGATCATGGTGTTGATAGACCTTCAATGGGAGATGTTCTTTGGAATTTGGAGTATGCATTGCAACTTCAAGAAGCTTTCACACAAGGAAAAGTTGAGGATGAGACTAAATCTTCTTCAGCTGTTGTTCTTCCTACTACTACACCTCCCACTGTTAAGCTTAGATCCCTTTGA 2445 0.3751 MLASSQHFLSSFSILLVILLAFFTCTISSSFIPKDSFLIDCGSENVVTLPDGRTFKSDPQANSFLQANDDYKVSSNDNSVNLPSPIYSNARIFIQEAKYSFHLVQPGFHWIRLHFYPIKNNVFDLQKATFSVNTETFVLLHSFNVNNTDKPILKEYLINATEPQLTISFIPLKNSAAFINAIEVVSAPDNFLFDSGSGLFPVADVTGLTTYAFQPVYRLNNGGPLITSSNDTLGRVWESDENFLTNKNLAKSVSVATNAIKFPSDMPTISPLIAPQTVYASATEMGDAGVNMPNFNVSWKFDVDTSFSYLLRLHFCDIVSKGLNQLYFNVYVNGKIAIPNLDLSAINGALSTPYYKDIVVNATLMTQGLTVQVGPANADGGNANAILNGIEVLKISNTVNSLDGEFGVDGRRVGGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKTSMGKSNVFSSSMGLGRIFSFAEIQEATKNFDSKNIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSMIGYCDENEEMILVYEYMPNGHMRDHLYGKNMPPLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLIGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKVEDETKSSSAVVLPTTTPPTVKLRSL 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02572 814 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Car07g02572 814 CDD STKc_IRAK 511 775 - -
Car07g02572 814 Pfam Malectin-like domain 39 394 IPR024788 -
Car07g02572 814 PANTHER BNAC03G60370D PROTEIN 21 808 - -
Car07g02572 814 Gene3D - 213 397 - -
Car07g02572 814 Gene3D - 36 188 - -
Car07g02572 814 SMART serkin_6 505 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02572 814 PANTHER OS07G0166700 PROTEIN 21 808 IPR045272 GO:0004714|GO:0006468
Car07g02572 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Car07g02572 814 Gene3D Transferase(Phosphotransferase) domain 1 581 800 - -
Car07g02572 814 SUPERFAMILY Protein kinase-like (PK-like) 488 772 IPR011009 -
Car07g02572 814 Pfam Protein tyrosine and serine/threonine kinase 508 702 IPR001245 GO:0004672|GO:0006468
Car07g02572 814 Gene3D Phosphorylase Kinase; domain 1 467 580 - -
Car07g02572 814 ProSiteProfiles Protein kinase domain profile. 505 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02572 Car-Chr7 49119873 49122317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02572 29 806 Receptor kinase-like Gene Family AT4G39110 69.309 0.0 1143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car07g02572 Malectin_like 1.2e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02572 - - gmx:100793784 1434.85