Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02562 ATGAGACTTACCTTCTTCCAGGACTTGTTGCTCCATTTTAATTTTAAAGTATCAAGGTCATCAATTATCCAAGGTCAAAGGAGAAGAGTTTCAGAAGTAGTCGAAATCAACACCCTCATCCCTAGCAAAAACCTCTGCAAGCTTCAAGATATTGAGGGAAGAAAAAAAACTACAAATCTTGATAGTACTTTCATGGTAATGGAATACATGGAACATGATCTTAAAGGATTTATGGAGTCAATGAAGCAACCGTTTAGCCAAAGTGAAGTGAAGTGTTTAATGATCCAGCTTCTAGAAGGTGTGAAGTATCTTGATGACAACTGGGTGCTTGATAGGGATCTGAACACTTCAAACCTGCTTCTAAATAACAGGGGTGAGCTAAATATTTGTAATTTTTGGTTGGCTCGCCAATATGGGAGTCCTTTGATACCGTATACTCACCTGGTGGTTACTCTTTGGCACAGATTATTCGCTTATGCTTACCTTGACTTAGGGATTGAGAGCAGGATTGAGAGCAGAATTGCAGATTATTCACTTACTATTGCTAATATCGTCGCCTACTTACCGTTTAGGTGGCACCAACAAGATCCAGCTAAGGCAAGGAACTTTGTGTCATGGCTGCTCCACTCCGCCGCGGATAACACTCCGGTTAATAGAACTACAAATCTTGATAGTATTTTCATGGTAATGGAATACATGGAACATGATCTTAAAGGATTGATGGAGTCAATGAAACAACCATTTAGCCAAAGTGAAATGAAGTGCTTAATGATCCAGCTTCTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTGATAGGGATCTGAACACTTCAAACCTGCTTCTAAATAACAGGGGTGGCACCAGCGAGATCCAGCTAAAGCAAGGAACTTCATGTCGCAGCTGCTCCACTCCGCCGCGGTCTCATGAACTGAACTTCGTTGCCTTCCCGCGCGCGAAGCGTATGGGCGTTGTGCAGTGGGTTTGCGGTGGGTCAGTTTTGGGGCGGGGAGCGAAGAGAGAGGATTTTGCATGCTCTGGAATGGTACGGGGAGAGAGGGGGATTAAAGATTTTAGCAATTGA 1089 0.4316 MRLTFFQDLLLHFNFKVSRSSIIQGQRRRVSEVVEINTLIPSKNLCKLQDIEGRKKTTNLDSTFMVMEYMEHDLKGFMESMKQPFSQSEVKCLMIQLLEGVKYLDDNWVLDRDLNTSNLLLNNRGELNICNFWLARQYGSPLIPYTHLVVTLWHRLFAYAYLDLGIESRIESRIADYSLTIANIVAYLPFRWHQQDPAKARNFVSWLLHSAADNTPVNRTTNLDSIFMVMEYMEHDLKGLMESMKQPFSQSEMKCLMIQLLEGVKYLHDNWVLDRDLNTSNLLLNNRGGTSEIQLKQGTSCRSCSTPPRSHELNFVAFPRAKRMGVVQWVCGGSVLGRGAKREDFACSGMVRGERGIKDFSN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02562 362 ProSiteProfiles Protein kinase domain profile. 1 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02562 362 SUPERFAMILY Protein kinase-like (PK-like) 220 288 IPR011009 -
Car07g02562 362 SMART serkin_6 15 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02562 362 PANTHER CELL DIVISION PROTEIN KINASE 60 155 - -
Car07g02562 362 PANTHER - 60 155 - -
Car07g02562 362 Gene3D Phosphorylase Kinase; domain 1 216 232 - -
Car07g02562 362 Gene3D Phosphorylase Kinase; domain 1 25 69 - -
Car07g02562 362 PANTHER - 222 288 - -
Car07g02562 362 SUPERFAMILY Protein kinase-like (PK-like) 34 155 IPR011009 -
Car07g02562 362 Gene3D Transferase(Phosphotransferase) domain 1 70 155 - -
Car07g02562 362 Gene3D Transferase(Phosphotransferase) domain 1 233 288 - -
Car07g02562 362 PANTHER CELL DIVISION PROTEIN KINASE 222 288 - -
Car07g02562 362 Pfam Protein kinase domain 26 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02562 362 Pfam Protein kinase domain 223 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02562 Car-Chr7 48886402 48889267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02562 225 288 Core Cell Cycle Gene Families AT5G64960 50.000 4.38e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Car07g02562 Pkinase 2.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02562 K08818 - rcu:8278447 180.644