Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02542 ATGAAATGGGTTCTGGCAGGTCCAACAGAGATAGAGCTTCCTTCAATTTGCATAATTCAAGGAAGGCACTCTTCAGTTTATTTCTGTCATCCACAAGCCATCTTAGTCTCTCTGAAAAATCAAGCATTTTGGGCTGATACCATTCAACATGAGTCAAGATTTCTTCTACTTGCTCAAAAATTGTATAATTTTGTTGCAATGAACTATGCACGATTCAATCATATTTTTATTTCGGGCCAACTCATCTTTCATATTAGTGCCTTTGTCAGAAAGTCGGTTTCAGAGCGGTTTACGGTCACCGCTACTACTGGTGAATGTAGACAACATTGGGTAGGGTTTCCGGAGAAAAGGTTATACCCAAGTGGCAAATTCTTTGATCCTCTTGGTTTAGCCAGTGATCCTGAAAAGAAAGAAAGACTTCAATTGGTAGAGATTAAACATTCTCGCTTGGCTATGGTTGTTTTCCTCATCTTTGCAATCCAAGCTGCTGTTACTGGAAAATGTCCTATTGCTTTCATTGCTACCTTCAACCAGTGA 537 0.3948 MKWVLAGPTEIELPSICIIQGRHSSVYFCHPQAILVSLKNQAFWADTIQHESRFLLLAQKLYNFVAMNYARFNHIFISGQLIFHISAFVRKSVSERFTVTATTGECRQHWVGFPEKRLYPSGKFFDPLGLASDPEKKERLQLVEIKHSRLAMVVFLIFAIQAAVTGKCPIAFIATFNQ 178
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car07g02542 178 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 114 177 - -
Car07g02542 178 SUPERFAMILY Chlorophyll a-b binding protein 116 175 - -
Car07g02542 178 Pfam Chlorophyll A-B binding protein 103 162 IPR022796 -
Car07g02542 178 Gene3D Chlorophyll a/b binding protein domain 23 178 - -
Car07g02542 178 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 114 177 IPR001344 GO:0009765|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Car07g02542 Car-Chr7 48332993 48338304 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02542 115 175 Chloroplast and Mitochondria Gene Families AT5G01530 73.770 8.06e-25 95.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02542 K08915 - fve:101300760 114.775