Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02539 ATGGCGGTTGAATTTGTTGGCAGTGCTCTTCTTTCTGCTTCCCTTCAGGTTGCATTTGACAGGTTGGCTTCATCTGAAGTTGTGGAATACTTTCAAAGCAGAAAATTCAATGAGAAGCTTCTTAATAGGCTCAACATCATGCTACTATCGATCAATGTTGTGGTTGATGATGCAGAGCAAAAGCAGATCATAAATCGTCATGTGAAAGCATGGCTTGATGCTGTTAAAGATGCTGTGTTTGATGCAGAGGATTTGTTAGATGAAATTGACATTGAAGTTTCCAGATGCAAGCGGGAAGTTGAGTCTCAGTCTAGTCCTAGCAAGGTATGGAATTTCTTCAATGTTTCTTTCAGTTCATTTGACAAAGAAATTGAATCAAAGATGCAAGAAGTACTTGATAATCTAGAATTTCTTGCTAGCAAAAAGGATATATTAGGTTTGAAAGAATCTAGTAGTGGTTTTGGTGTTCAATTGAGTAGTCAAGTGTCACGAAAATTGCCATCAACATCTTTGCTTGGCGAAACTGTTTTATATGGCAGAGATATTGACAGAGAAATTATATTTGATTGGATGATATCTGAAAATGAAAATCATTTTTCAATAGTTTCTATAGTTGGTATGGGTGGTATGGGTAAGACCTTACTTGCTCAACATTTATACAATGACTCAAAGATGGAAGATGAATTTGATATCAAAGCTTGGGTTTGTATTTCCGACGATTTTGATGTTTTCATGGTTACAAGAGCTATTCTTGAGGGTATCAATAGGTCAACTGATGATAGTAGAGACCTAAACATGGTTCAAGAAAGGTTGAAGGAAAAATTGACAGGAAAGAGATTTCTTCTTGTTTTGGATGATGTTTGGAACGAAAAACATGACCAATGGGAAACTTTACAAACTCCTTTTAAATATGGAGCTCAAGAAAGCAAAATAATCGTTACTACACGCAGTTTGAAAGTTGCTTCAACTATTCGATCCACTCATATACACCAGCTAGAGCAATTAAAAGAAGAACATAGCTGGTTATTATTTGCTAAACATGCATTCCAAGATGAAAATCCTCAATTGAATCCTGAGTTGAAGGAGATTGGTAAAAAGATAACTGGAAAATGCAAAGGATTACCTCTAGCTTTGAAAACAATTGGAAGTCTCTTATACACCAAATCATCTTTGGTGGAATGGGAAATAATATTGGCAAGCGAGATATGGGACTTACCTGAAGAGGTTAGCAATGTCATCCCTGCTTTAAGACTTAGCTATCACCACCTTCCTTCTCATCTGAAGAGATGTTTTGCTTATTGTTCTTTATTCCCAAAAGGTTTTGTGTTTGAAAAGAAGCATTTAACTTTATTATGGATGGCTGAAAATTTTCTACAATGTCCTCAACAGAATAAGAGTATGGAAGAAGTTGGCGAACAATACTTTGATGATTTGTTGTCGAGGTCATTTTTTCAACAATCAAGCGAAGACAAAACGTGTTTTGTAATGCACGACCTTCTTAGTGATTTGGCAAAATATATCTGTGGTGATTTTTGTTTTAGGTTGGAAGTTGAAGAAGCACAAAACATATCAAAAGTTACACGTCATTTTTCTTTTTTGAGAAATAGATATGATTCTTCTAAAAGGTTTGAGGCCTTGTGCAAGGCTGAAAGATTGCGTTCATTTCTACCATATAGCAGGAAGTGCAATCTACCATCTTTTCTTAATGAATTTTGGATGTCTGGTCCTTTGGTGAATGACTTGCTCCCCAAGTTTAAGCTCTTACGTGTTTTATCTTTGTCTGGTTATTACAATATGATTGAAGTTCCTGACACTATAGGTAATCTTAAACATCTCCGTTATCTTGACCTTTCCGATACCAACATAAAAAAGCTACCTGATTCAATATGTTTTCTTTTTAACTTGCAAATATTGAAGTTGAAGAATTGCCGATTTTTGGATGAGCTGCCTTTGAATTTTCATCAACTTACTAATATGCGTTATCTTGATTTTAGTGGAACCAAGGTGAGAAATATGCCAATTCATTTTGGAAAATTGAAGAATCTTCAAGTGCTGAATTCATTCTGTGTAGGAAAAGGCAATGAGTCTAATATTCAACAGTTAGGTGAACTCAATCTTCATGGAACACTATCAATTTCAGAGTTGCAGAATATTGTGAATCCCTTTGATGCATTAGCAGCCAATTTGAAAAATAAAATACACCTTGTGAAGCTAGAGTTAGAATGGAATGCAAACAATGAAAACTCACAACAAGAAAGGGAAGTGCTTGAGAAGCTACAACCTTCAAAACACTTGAAGGAGCTATCAGTTATAAGCTATGGCGGAACAAGATTTCCAGATTGGTTTGGAGATAGTTCACTATCTAATTTAGTCTCCTTGAAGTTGAGTAACTGTGAAAAATTTCTCTTGTTGCCTCCACTTGGAACTTTACCATCTCTCAAGAAACTGTGCATTATAGGACTCTCTGGTGTAGTGGTTATTGGCTCAGAGTTTTATGGCAGTAGCTCTTCAAATGTTCCATTTTCATCCTTGGAAACCTTACAATTTGAGGATATGGTGGAATGGGAAGAATGGGAATGCAAAACAGCGACAAATGCATTTCCATTTCTTCAAAAACTTTCTATAAAAAATTGTCCAAATCTAAGATACTTTTTGCCAGAGAAACTTCCTTTTTTAACAATGCTAGAAATTTCTCATTGTGAACAACTTGTAGCTTCTATTCCTAGGACTCTAATCATCCGTGAATTAGATCTAAATGATTGTGGAAAGCTGCAATTTGATTATCATCCAGCTACTTTGAAAATTATCAAAATTGGTGGATACAACATGGAACTGTCATTGCTTGAGAGGATTGAGCCAATCATATCCAATATCTCCCTTGAAAGAATTAAAATTACTGATTGTCCTAATATGAATATTCC 2921 0.3533 MAVEFVGSALLSASLQVAFDRLASSEVVEYFQSRKFNEKLLNRLNIMLLSINVVVDDAEQKQIINRHVKAWLDAVKDAVFDAEDLLDEIDIEVSRCKREVESQSSPSKVWNFFNVSFSSFDKEIESKMQEVLDNLEFLASKKDILGLKESSSGFGVQLSSQVSRKLPSTSLLGETVLYGRDIDREIIFDWMISENENHFSIVSIVGMGGMGKTLLAQHLYNDSKMEDEFDIKAWVCISDDFDVFMVTRAILEGINRSTDDSRDLNMVQERLKEKLTGKRFLLVLDDVWNEKHDQWETLQTPFKYGAQESKIIVTTRSLKVASTIRSTHIHQLEQLKEEHSWLLFAKHAFQDENPQLNPELKEIGKKITGKCKGLPLALKTIGSLLYTKSSLVEWEIILASEIWDLPEEVSNVIPALRLSYHHLPSHLKRCFAYCSLFPKGFVFEKKHLTLLWMAENFLQCPQQNKSMEEVGEQYFDDLLSRSFFQQSSEDKTCFVMHDLLSDLAKYICGDFCFRLEVEEAQNISKVTRHFSFLRNRYDSSKRFEALCKAERLRSFLPYSRKCNLPSFLNEFWMSGPLVNDLLPKFKLLRVLSLSGYYNMIEVPDTIGNLKHLRYLDLSDTNIKKLPDSICFLFNLQILKLKNCRFLDELPLNFHQLTNMRYLDFSGTKVRNMPIHFGKLKNLQVLNSFCVGKGNESNIQQLGELNLHGTLSISELQNIVNPFDALAANLKNKIHLVKLELEWNANNENSQQEREVLEKLQPSKHLKELSVISYGGTRFPDWFGDSSLSNLVSLKLSNCEKFLLLPPLGTLPSLKKLCIIGLSGVVVIGSEFYGSSSSNVPFSSLETLQFEDMVEWEEWECKTATNAFPFLQKLSIKNCPNLRYFLPEKLPFLTMLEISHCEQLVASIPRTLIIRELDLNDCGKLQFDYHPATLKIIKIGGYNMELSLLERIEPIISNISLERIKITDCPNMNI 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02539 973 PANTHER OS05G0414200 PROTEIN 17 972 - -
Car07g02539 973 Pfam Rx N-terminal domain 11 103 IPR041118 -
Car07g02539 973 ProSiteProfiles Leucine-rich repeat profile. 611 632 IPR001611 GO:0005515
Car07g02539 973 SUPERFAMILY L domain-like 495 911 - -
Car07g02539 973 PANTHER DISEASE RESISTANCE PROTEIN RP 17 972 IPR044974 GO:0006952
Car07g02539 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 434 IPR027417 -
Car07g02539 973 Gene3D - 419 506 IPR036388 -
Car07g02539 973 Gene3D - 334 418 IPR042197 -
Car07g02539 973 Gene3D Ribonuclease Inhibitor 562 969 IPR032675 -
Car07g02539 973 Gene3D - 159 330 IPR027417 -
Car07g02539 973 Gene3D - 15 132 - -
Car07g02539 973 PRINTS Disease resistance protein signature 371 385 - -
Car07g02539 973 PRINTS Disease resistance protein signature 785 801 - -
Car07g02539 973 PRINTS Disease resistance protein signature 201 216 - -
Car07g02539 973 PRINTS Disease resistance protein signature 274 288 - -
Car07g02539 973 Pfam NB-ARC domain 187 420 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02539 Car-Chr7 48284797 48287788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02539 191 440 WRKY Transcription Factor Family AT5G45050 26.772 1.34e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02539 - - gmx:100781012 1152.12