Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02520 ATGCTAAAGTCATTTATACCGTTCTCCGGCAACCCGGCACCGTCCTTCCTGTGTGAGAGTGGAGCCTTGCCTTGCCACCGTAATCTTCCACTTTCGTCTGACTGCTGCTGTTGTCCTCCATTCCCGCTAGGGTGGAAAAAGGCACTCACAGGAGTGAAAAACATGGGGCCATTTAGGTCTATTATTACAGAAGCATGGGAAAAAACTTTCATTTTAACAAAGTTCTTCTGCTTTTTACATGTTACCGACACCTATCTGATCAACCATGTTATGACCTATGGTCCTAGCATGCTTCCTGCAATCGATCTGTCACCAACCGACTTTCTTGCTGAAAGGATCTCAACTCGATTTGGTAAACTTGCTCAAGGAGATATTGTAGTATTGCGCAATCCTCAAAACCCTAGAAAGACCGTCACAAAGCGCTTGGTTGGATTAGAGGGTGATACCATTACATATGTTTCTAGTTCCGAAAACAGCGATATGCATGAGACAGTTGTGGTTCCCAAAGGCCACGTTTGGGTACAAGGTGATAACACATATAATAGCAACGATTCTAGACATTTTGGTCCAGTTCCTTACGGCCTTATTGAGAGTAAGCTATTTTGGAGGATTTTGGACCATTCTGGAAAAAATAATTTGAAGATTTCAATAATAGGACTTGCTCAACATATCTTAAGGGCCAAGACAAAATTATAA 696 0.4224 MLKSFIPFSGNPAPSFLCESGALPCHRNLPLSSDCCCCPPFPLGWKKALTGVKNMGPFRSIITEAWEKTFILTKFFCFLHVTDTYLINHVMTYGPSMLPAIDLSPTDFLAERISTRFGKLAQGDIVVLRNPQNPRKTVTKRLVGLEGDTITYVSSSENSDMHETVVVPKGHVWVQGDNTYNSNDSRHFGPVPYGLIESKLFWRILDHSGKNNLKISIIGLAQHILRAKTKL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02520 231 Pfam Signal peptidase, peptidase S26 76 152 IPR019533 GO:0004252|GO:0006465
Car07g02520 231 Pfam Signal peptidase, peptidase S26 162 199 IPR019533 GO:0004252|GO:0006465
Car07g02520 231 Gene3D Umud Fragment, subunit A 79 219 - -
Car07g02520 231 PRINTS Bacterial leader peptidase 1 (S26A) family signature 85 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Car07g02520 231 PRINTS Bacterial leader peptidase 1 (S26A) family signature 138 150 IPR000223 GO:0006508|GO:0008236|GO:0016020
Car07g02520 231 PRINTS Bacterial leader peptidase 1 (S26A) family signature 167 186 IPR000223 GO:0006508|GO:0008236|GO:0016020
Car07g02520 231 SUPERFAMILY LexA/Signal peptidase 85 213 IPR036286 -
Car07g02520 231 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 53 206 - -
Car07g02520 231 ProSitePatterns Signal peptidases I signature 3. 172 185 IPR019758 GO:0004252|GO:0016021
Car07g02520 231 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 53 206 - -
Car07g02520 231 CDD S26_SPase_I 90 199 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02520 Car-Chr7 47714566 47720302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02520 97 204 MADS-box Gene Family AT1G29960 56.481 1.96e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02520 K09647 - cam:101492717 224.942