Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02496 atgacaacaaaagctagaggaaagcaaccatcacgagcacaaatttatattaatactcgaactcgaaaagatggaaGTGAATGGAGAAAACATTGGGTAGGGTTTTCGGAGAAAAGGTTATACCCAGGTGGCAAATTCTTTGATCCTCTTGGTTTAGCCAGTGATCCTGAAAAGAAAGTAAGACTTCAATTGGCAGAGATTAAACGTTCTTGCTTGGCTATGGTTGTTTTCCTCATCTTTGCTATCCAAGCTGCTTTTACTGGAAAATGTCATATTGCTTTCATTGCTACCTTCAACCAGGCAAGATTACAGGTTAGTGATAACAACGACCTCACTGTGATTGAAGACAAACTTGCTTGGATTGTCCACATCGTAGCCGCAATTCTTAAGATAAAACAATGTACAGGTTGTAGCGTGGAATCCCAAGAAGTGCTAGATGCCGAAATTTCAGCTCGGGTTCTGCAGTTGATCAACGTAACTGACAGTGGAGTACACAGTCAGCAAATGAGTTGTTTTTTTTTTTGTTGGACTATCAAAGGAGAAACTGATATGGGGGCAATTTTGGAGTTTCCTGTTGAGTAG 582 0.3557 MTTKARGKQPSRAQIYINTRTRKDGSEWRKHWVGFSEKRLYPGGKFFDPLGLASDPEKKVRLQLAEIKRSCLAMVVFLIFAIQAAFTGKCHIAFIATFNQARLQVSDNNDLTVIEDKLAWIVHIVAAILKIKQCTGCSVESQEVLDAEISARVLQLINVTDSGVHSQQMSCFFFCWTIKGETDMGAILEFPVE 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02496 193 Pfam Chlorophyll A-B binding protein 31 84 IPR022796 -
Car07g02496 193 Gene3D Chlorophyll a/b binding protein domain 12 108 - -
Car07g02496 193 SUPERFAMILY Chlorophyll a-b binding protein 28 98 - -
Car07g02496 193 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 37 99 - -
Car07g02496 193 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 37 99 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02496 Car-Chr7 46968648 46974757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02496 36 115 Chloroplast and Mitochondria Gene Families AT5G01530 60.000 5.18e-23 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02496 K18460 - ccaj:109790680 126.331