Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02494 ATGGCATCCTCAAATTCACCATGTGCAGCATGCAAGTTTCTACGCCGCAAATGTCAACCAGAATGTGCATTTGCACCTTATTTCCCACCTGATCAGCCTCAAAAATTTGCAAATGTTCATAGAATTTTCGGTGCAAGTAATGTTACAAAGCTTCTCAACGATTTACACCCTCACCAACGTGAAGATGCTGTTAATTCACTCGCTTATGAAGCCGAAATGAGACTCCGTGATCCAGTTTACGGTTGTGTAGGTGTTATTTCTCTTCTTCAACATCAACTTCGTCAGCTTCAAATGGATCTTTATTGCGCGAAATCGGAACTCTCTAGGTACCAAAATTTAAGCATAGCGGCCACGACAGGTCATGGTCTGATGACTAATGAATCTGTCGCGGCCGTTAATAATTATCACCACACACAGAATACTACTGCAGTTGTTGGTGGTAATAGTAATGGCCGTGACCATCACTATCACCATCGTCATCATCAATTTTTTCCGAACCAACAAAATAATATTGTGAGAAATTTTGATGGTGGAATTGGGAACAACTATGATACTAGTCTTTTGGCTATGAATATATCTGCTAGCTTAGGGCAGTTCAATCAGGTTCAACACCATAGTGCTGCCGGAGGTGGTGGTGAAGACCGCCGTACTGTTAACCGCTCCTAG 666 0.4234 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSIAATTGHGLMTNESVAAVNNYHHTQNTTAVVGGNSNGRDHHYHHRHHQFFPNQQNNIVRNFDGGIGNNYDTSLLAMNISASLGQFNQVQHHSAAGGGGEDRRTVNRS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02494 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 180 - -
Car07g02494 221 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Car07g02494 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 180 - -
Car07g02494 221 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02494 Car-Chr7 46914438 46915108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02494 2 221 AS2 family AT1G65620 62.727 1.41e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car07g02494 LOB 3.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02494 - - mtr:MTR_8g040900 389.808