Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02451 atgcatatatactgtaacatcacacaagcttatctgagattgggcaggaggagagatggaaacgaatataaatttatcgagagtattgtaaaggaagtctttcgcatgatttctcgcgtttcttctttacatgttgctggttaccctgttggattggagtctcgagtggataaagtaaactcacttctgaatcttgggtctgatgatttagttcaaatggtagggatatggggaattggtggaatagggaagaccacaattgctcgagccgtatgtaattcaatcagtcacttgtttgaaggtttatgttttctcaatgatgtgagacagaattcaatgaagtatggcttggtacatctccaagagactgttctttctgagatatgtggagatgtaaataaaataaagagtgtcaaccaaggaattccaataataaagcagaaactccaccggaaaaaggttcttttagttcttgacgacgttgacaatttgaagcaactccaggttattgcaggagcatctgattggtttggtcctggaagcagaatcatcgttacaactcgggacaagcattttctagtaagtcatgcgattgaaagaatatatgaagcagacgcattaagtgaaaaagaatctcttgatttgcttagttggaatgcttttaaaaccgacaaagttgatccatgttttgtagacattttaaaacgtgcattgacttttgcttctgggcttccattggctttgcaagtagtaggctcctacttgtttggcagaagtataaatcagtggataagtgcattggatcattatgaaagagttcccgataaacatatccaaacagtactcaagataagctacgattccttagaggaagaagagaagagtgtttttcttgatattgcttgtttcttcaatggacataagttagaagacgtcaaagatatacttttggctcgttatggtgtatctgcaaaatatagtattgaagaattgattgaaaaatctctcataaagatcgatgatggtcttgtgacattacataacttgattcaagacatgggtagagaaattgtccgacaggaatcaccatatgagcctggcaaacgcagtaggttatggcttcctaaagatgtagtttgcgttttagaaaaaaactcgggttctagtacaattgaaagcttatttttggatttccccaaagatgaagtgaattcacatggacccaaaggtaaagaagtatattgggatggacaagctttaaagaggatgcaaaacctcaaaatacttgttattaaaagtggttgttttaacaaaggccccacacatcttcccaatagtttaaaagtgttgaaatggcgagggtatccttcagcgtcattaccaaatgattttcatccgaagaagcttgccatactcgagttacctgcaagttgcgtagtggtaactgaaccaattcagacgtttagaagcctgaaatatatgaatttaaactactgtgaactgataactcatatacctgatgtatctggcctcccaaatttagaaacattgtcatttagagattgtgtgaatttatctgaaattcatgtgtcagttggatttctggataaacttaaaatcttggatgctggtcattgcaagaaacttatggcttttccacccatcagattgatctctcttgaacaattctatatttcacattgctcaactctagaaagtttcccagaaatattggggaagatggaaaatttaacagagcttcgaatcatcggaagtcctatacaagaattgccattttcaattcaaaacctaaatcggcttcgaaaattagaactacaaatctgtggaacggttcagttgccaagtagcattgccatgttttcacaacttggtttgatgtgtgtttcgagatgcgaagggttatggttaacaaaacaggacataggtgaagaatgggataccaagtcttcaaagacagaacgtcttattctgtcgtactgcaatatatcagatgacttccttccaataggtcttactttgtttgccaatgtaaaggatttggacctgtcggggaatcatttcactattcttcacgcgtgcattaaggaatgtcactttctgaggaaccttaagctgaatgattgcgtgcttatacgagaaattacagtgatgccatgtaaattagaaacactttctgcaaaacgatgcaaatccttgaaATACATGGATCTTACAGGAGAATGTCACTCTTTGAGAGAACTTACTCTGGATGATTGTATTTATCTTCGAgaaattaaaggggttctgtcaaacttggatcatttctctgcaaaaaactgcacattattgacttcccaatgtgcaagcatgttagtgaatcaggaaatgatcgaagctggaaacaagatgttttctttgccaggatcaaatattccggattggtttgcgcaccgtacaagtggagagtcaatatctttctggtttcgtaacaaattccctgcaATTTCTCTGTGTCTTGTTATTGGACAGGAAGATGAGCTACCTATCTCAGTCAAGTTTAGTCCAAAAGTGCTCATCAATGGCAATGAACTGTCCGGTGGCAATCAGAAAGTCTACAAGTTCAGGATAGCTACGGATCATATACTTTTGTTTGATGCACGGATGCTAAGTTTTGAAGATAATGGAGATACAGAATTGTCAGACTATGAGTGGAACCATGTGGTGGTTTCATATGAGGATCTTATTACTGACAACGGGGTTCCAATCAGAGTGGTTGCCAAATATAGCGGAATCCATGTATTTAAACAAACGAGTGGACTGGAGGATATCCAATTCACCAATCCCCGGAAAACATTTATAAATGCGAATTTGGGTCCCAATTCAATGGCAGAGCCACCTCAAAGAGAAACTTCAGAGAGTCTTTCAAATAATGAAGTTTATGCTACTTTAAAAGAAAATGACCCTCCTGTCATTCACGGATGTAGTGTCGACGAGGATGCCGATCTGGATGCAGTATCCTGTGAGGAAGAGTCTTCTTCCAACACTGAAGGTTCTGATTCAGATGATCCCTTCGACTTGATTAATAGAAAACTCTGTGTTAGTTGGAAGAAAATCATATCCTCAGGATCAAGTTCTGGAGATGCAAATCTAAGATCCATTAGCGAGGCTATTAATGCCTTGGAGTTGTTAATGGTGAAGGACTTATCAGAAGTCTCTTCTGATCCCGCAGCGCATTCCAAACTTCATCAGCTCTTGGATCTATTGGGTGCAAGTAGCCACCCCAAGGTGACTGTAGAGATGAAGGAGGCTATTGTGGAGTTCAAGAGAAAGGCCTTTTTATTATTCCAACAATTCCAATCCACTGTTGAGTCTGTCAAAACACTGAAGGATTTTGAGAAGCATCTGACCAGAATTAAGCAAGAGACTGTGGAAGGCAAGAGTCGAAGAAAGGACCTAAAAAACTCAATAAAAAGGGTTTCTTTGGGCATCAAAGCCGAAAATAGTAGTAAAAAGGAGCTAGAGTCAGAAATTGCAGTTTTAAGAAAACAACTAGCTACCAAAGAAAGGGACCTTGAACAATTTGTGGTGAATCTCAAGAATCAGGAGGAAACACTCTCGACCTATTCAACAAGTTATGCTTCTCTCAACGAGCAAGCTCAATCACTATTAAAACAAGCTGATGATCTACTTGCTGTAAGCAGTGGGATAAAGGATGAGGGTGAAGCAGCTGAAGTAGAGCAGAGTAGGCTCAGGTGGACTTGGTCTATTGATCTTACTGGCCAGCTTAATCAGATGAAAAAAAACATTCTTGGCTTCTAA 3819 0.1479 MHIYCNITQAYLRLGRRRDGNEYKFIESIVKEVFRMISRVSSLHVAGYPVGLESRVDKVNSLLNLGSDDLVQMVGIWGIGGIGKTTIARAVCNSISHLFEGLCFLNDVRQNSMKYGLVHLQETVLSEICGDVNKIKSVNQGIPIIKQKLHRKKVLLVLDDVDNLKQLQVIAGASDWFGPGSRIIVTTRDKHFLVSHAIERIYEADALSEKESLDLLSWNAFKTDKVDPCFVDILKRALTFASGLPLALQVVGSYLFGRSINQWISALDHYERVPDKHIQTVLKISYDSLEEEEKSVFLDIACFFNGHKLEDVKDILLARYGVSAKYSIEELIEKSLIKIDDGLVTLHNLIQDMGREIVRQESPYEPGKRSRLWLPKDVVCVLEKNSGSSTIESLFLDFPKDEVNSHGPKGKEVYWDGQALKRMQNLKILVIKSGCFNKGPTHLPNSLKVLKWRGYPSASLPNDFHPKKLAILELPASCVVVTEPIQTFRSLKYMNLNYCELITHIPDVSGLPNLETLSFRDCVNLSEIHVSVGFLDKLKILDAGHCKKLMAFPPIRLISLEQFYISHCSTLESFPEILGKMENLTELRIIGSPIQELPFSIQNLNRLRKLELQICGTVQLPSSIAMFSQLGLMCVSRCEGLWLTKQDIGEEWDTKSSKTERLILSYCNISDDFLPIGLTLFANVKDLDLSGNHFTILHACIKECHFLRNLKLNDCVLIREITVMPCKLETLSAKRCKSLKYMDLTGECHSLRELTLDDCIYLREIKGVLSNLDHFSAKNCTLLTSQCASMLVNQEMIEAGNKMFSLPGSNIPDWFAHRTSGESISFWFRNKFPAISLCLVIGQEDELPISVKFSPKVLINGNELSGGNQKVYKFRIATDHILLFDARMLSFEDNGDTELSDYEWNHVVVSYEDLITDNGVPIRVVAKYSGIHVFKQTSGLEDIQFTNPRKTFINANLGPNSMAEPPQRETSESLSNNEVYATLKENDPPVIHGCSVDEDADLDAVSCEEESSSNTEGSDSDDPFDLINRKLCVSWKKIISSGSSSGDANLRSISEAINALELLMVKDLSEVSSDPAAHSKLHQLLDLLGASSHPKVTVEMKEAIVEFKRKAFLLFQQFQSTVESVKTLKDFEKHLTRIKQETVEGKSRRKDLKNSIKRVSLGIKAENSSKKELESEIAVLRKQLATKERDLEQFVVNLKNQEETLSTYSTSYASLNEQAQSLLKQADDLLAVSSGIKDEGEAAEVEQSRLRWTWSIDLTGQLNQMKKNILGF 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02451 1272 PRINTS Disease resistance protein signature 241 255 - -
Car07g02451 1272 PRINTS Disease resistance protein signature 73 88 - -
Car07g02451 1272 PRINTS Disease resistance protein signature 148 162 - -
Car07g02451 1272 PRINTS Disease resistance protein signature 533 549 - -
Car07g02451 1272 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 741 IPR044974 GO:0006952
Car07g02451 1272 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 745 910 IPR044974 GO:0006952
Car07g02451 1272 Gene3D - 38 200 IPR027417 -
Car07g02451 1272 MobiDBLite consensus disorder prediction 954 975 - -
Car07g02451 1272 Pfam NB-ARC domain 53 289 IPR002182 GO:0043531
Car07g02451 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 300 IPR027417 -
Car07g02451 1272 Gene3D - 206 290 IPR042197 -
Car07g02451 1272 SUPERFAMILY L domain-like 346 763 - -
Car07g02451 1272 Gene3D Ribonuclease Inhibitor 412 571 IPR032675 -
Car07g02451 1272 PANTHER ARCHAEAL ATPASE 19 741 - -
Car07g02451 1272 PANTHER ARCHAEAL ATPASE 745 910 - -
Car07g02451 1272 Coils Coil 1163 1232 - -
Car07g02451 1272 Gene3D Ribonuclease Inhibitor 572 789 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02451 Car-Chr7 45574958 45579878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02451 19 638 WRKY Transcription Factor Family AT4G12020 32.293 1.26e-75 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02451 - - mtr:MTR_8g042660 1319.29