Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02450 atggtaggtattcatggcattggtggaattggtaaaagtactgttgctcgagccgtatataattccattagtgaccaatttgaaggtttctgttgttttcttgaaaatgtgagagagaattcatgtaaacacggcttagtacatctccaagagacagttctttctgagatacttggagacaaggagatcaggttgggaaatgtgtggaatggaatgtcaattatacaacaaaggctctccggtagaaaagttcttttggttcttgatgatattgacaaaatagagcagttgcaagctatcgctggagcacctaattggtttggtttgggtagtagagtaatcattacaactcgagactatggcttactaaaacaacatgacgttaaaagtacatataaggtggaggagttgaatgacaaagaagctcgtgagttgctgtattggaatgctttcaaaactgacaaagttgattcaaggtacgccaccattttaaaccgtgcagtgggttatgcttctaggcttccattggctctggaagtaataggttccaacttgtttggaaaaggggaagaagaatgcaaacgtacattagatcggtatgaccgatttccagataaaaagatcaaagacatacttaaagtcagctataattcattggaggaagatgaggggaatgtttttcttgacattgcttgtttcttcaatggacataagttggcagatgtcgaagatatactttcggctcattacagcgtatctgtgaaatatagtattgaagaattgattgataaatcactcataaagattgatggtggtcttgtgacattacattacctgatacaagacatgggcagagacattgtccgagaggaatcaccacatgagcctggcaaacgtagtaggttatggttttgtgaagacatagtccaagttttaagcaaaaataagggaactagcgaaattcatatcttaattctggattttcccaaagatgaagcacacttgaaaggacccaaaggcgaagaaataaattgggatggagaggccttcaacaagatgaacaacctcagaacacttattataagaaatggtagtttctccaaaggccccatacatcttccaaatagattaagagttttgaaatggcaaggatatcctttaccatctttaccatgctatttccatccaaagaaactttccatacttgagttacttgatagctgcttaaagccatgtgaaccaatgcaggcattttcacatttgagaattttggattttagcaacagtgaatctgtaactgagatacccgatgtatctggtgtccaaaatttagaaaaattgtcatttagacattgtgagaatttaactaaagttcatgactcagttggacgtcttggaaatcttgtgatattggatgcttctggttgcaagaatctgaagacttttccacccatcatattgacctctcttgaacaacttaatctttcacattgttcaattcttgagagtttcccagaaatattggggaagatggaaaaagtaacagaacttctaataagggggagtcctataaaagaatatccattttcaattctaaaccttactcagcttcgaaaattggaactgcaattgtgtggaatggttcagttacctcgtagcattttcatgttacctgaactaagtatgatgcatgtttcaagctgtgaagggttgaccttatctgaacaagacaaaggtaaagtagtggtgccaaagtcttcaaacgtggatcatcttgttctctcatactgcaatatatccaatgactttcttccaataggtcttaacttttttttcaatgtgaaagatttaaatctatcggggaataatttcataacccttcatgcatggatcaaagaatgtcaccttttgaggaatctcaagatggacgattgcaggcgtctacaagaaattagagggattccGAGGAAATTAGAAAAAATTTCTGTGAAAGGATGCACAGCCTTGAGATGCTTAGACCTCACAGTTCTTCCTGAATGCACTGCAGAATGTTGCTTTCTAAAGGAACTTATTttggatgactgcgggtgtcttcgagaaattaaagggcttccaccaaacttggatagtttctctgcaaaaggatgcacagccttgagttcccagagtataagcatgctatttaaacagGAATGGGTAGAAGCTGGAAACAAAAAGTGTTTCTTCCCAGGGAAGAAAATTCCAGAGTGGTTCACGCATCGTACAAGGGGAATGTCAATGTATTTCTGGTTTCGTAACAAATTTCCTCCTATTTTTCTATGTCTGGTTATAGGACGTGGAGATAAGAAAGATATCAAGGTCAAGTTTAGCCCCCGTGTATCCGTCAATGGCAATAAATGGTCGCTTGGCTGTCATAAAGTTTATGAGTTCATGATAGAAACTGATCATGTGCTTTTGCTAAAATTTGAAGATAATGAGGACTTAGTGTTTTCAGATAAGGAGTGGAATCAGGTCGAGGTGTCGTATGCGGATCATATTACCAACAACGAGGACTCTATCAGACAGGTTGCTAGCTATTGTGGAATCCATGTATTATATGAACAAACATGTAGTCCTTGGGATGTCCAATTCCATCCCCCACAAACAATGATAAATGTGAATCTTGATTCATATTCAATGGAGACGCCACAGCAAAGAGTAAAGAATGATCAGACTTTTGTGTTATCTTCGCCGGTTCTCACGTTGACTCAACCTCCACCTACTGATGCAGAAAAGGTCTTAGTCCCTCAATCAATACTTCCAATTAAAAGGCCTTTGGAGGATGTCAGAGGAGATACATCAAAATGTTTTAGAGAGGATGAAGAAGTTTATGCTATTACAATTCAAAATAACCCTCCTTTCATTGAAAGATTACatgaggcatgtgatgatgatgatgatgTTCAACTGGAATCAGCATCCTCTTGTGAACTTCAATCTGCAGATTCTTCTTTCAACACCAACGGTTTTGACTCGGATGATCCCTCCAACTGTGTTGGTAGAAAACTCTCCATTAGTGGCGTGGAAGCCATATCTCAAGTGTCTTCTTCCAACACTGAAGTTTCACACTCAGATTATCCCATTAACTTAGTTGATAGAAAAATCTCTGTTAATGGCCATGCAACCATAATTTCTGAGGCTGCATCTCTTGGATCAATTAGAGAGGCTATCAATGCCTTAGAGCTTTTAATGGTTAAGGACTTATCTGAATTCTCTTCTGATCATGCTACGCAGTCCGGACTTCATCAGCTTTTGGATGTGTTGAGTAGAAGGACAATTGAGGTGCAAGAGGCTATTGGGGAGTTCAAAAGAAAGGCAGTTGAATCATGCCGAGAATTCCAATCCACTGTTAAGTCTATGAACAAACTGAAGAATTATGAGATGCGTCTGAATAGAATCAAGCAGGAGACTGCCACAAGCAACGGTCGACAGAATGAACTCAAAAACTCAATAAAAAATATTTCTTTGGCCATCAAGGATGAAAGTAGGAGGAAGAAGGAGCTAGAGGAAGAAATTGCTACATTAAAGGAACAACTAGATACAAAAGGAAGGGACCTTGACCAAATTGTGTTGAATCTTAAGAATAAGGAAACGACACTCTCAACATATTCAACCAATTGTGCTTCTCTCAATGAGCAAGCTCAAAAGCTATTAGAAGAAGCTGAAGGTCTACTTGGTGCAAGCAGTGAGATAAAGGATGAGGGTGAAGCTGCTGAAGTAAAGCAGAATAGTCTCAAGTCAACTTGGTCTACTGACATAACTAAACAGCTTAGTAAAATCAAGCATAACGTTTTGGGCTTGTATGAATGA 3849 0.179 MVGIHGIGGIGKSTVARAVYNSISDQFEGFCCFLENVRENSCKHGLVHLQETVLSEILGDKEIRLGNVWNGMSIIQQRLSGRKVLLVLDDIDKIEQLQAIAGAPNWFGLGSRVIITTRDYGLLKQHDVKSTYKVEELNDKEARELLYWNAFKTDKVDSRYATILNRAVGYASRLPLALEVIGSNLFGKGEEECKRTLDRYDRFPDKKIKDILKVSYNSLEEDEGNVFLDIACFFNGHKLADVEDILSAHYSVSVKYSIEELIDKSLIKIDGGLVTLHYLIQDMGRDIVREESPHEPGKRSRLWFCEDIVQVLSKNKGTSEIHILILDFPKDEAHLKGPKGEEINWDGEAFNKMNNLRTLIIRNGSFSKGPIHLPNRLRVLKWQGYPLPSLPCYFHPKKLSILELLDSCLKPCEPMQAFSHLRILDFSNSESVTEIPDVSGVQNLEKLSFRHCENLTKVHDSVGRLGNLVILDASGCKNLKTFPPIILTSLEQLNLSHCSILESFPEILGKMEKVTELLIRGSPIKEYPFSILNLTQLRKLELQLCGMVQLPRSIFMLPELSMMHVSSCEGLTLSEQDKGKVVVPKSSNVDHLVLSYCNISNDFLPIGLNFFFNVKDLNLSGNNFITLHAWIKECHLLRNLKMDDCRRLQEIRGIPRKLEKISVKGCTALRCLDLTVLPECTAECCFLKELILDDCGCLREIKGLPPNLDSFSAKGCTALSSQSISMLFKQEWVEAGNKKCFFPGKKIPEWFTHRTRGMSMYFWFRNKFPPIFLCLVIGRGDKKDIKVKFSPRVSVNGNKWSLGCHKVYEFMIETDHVLLLKFEDNEDLVFSDKEWNQVEVSYADHITNNEDSIRQVASYCGIHVLYEQTCSPWDVQFHPPQTMINVNLDSYSMETPQQRVKNDQTFVLSSPVLTLTQPPPTDAEKVLVPQSILPIKRPLEDVRGDTSKCFREDEEVYAITIQNNPPFIERLHEACDDDDDVQLESASSCELQSADSSFNTNGFDSDDPSNCVGRKLSISGVEAISQVSSSNTEVSHSDYPINLVDRKISVNGHATIISEAASLGSIREAINALELLMVKDLSEFSSDHATQSGLHQLLDVLSRRTIEVQEAIGEFKRKAVESCREFQSTVKSMNKLKNYEMRLNRIKQETATSNGRQNELKNSIKNISLAIKDESRRKKELEEEIATLKEQLDTKGRDLDQIVLNLKNKETTLSTYSTNCASLNEQAQKLLEEAEGLLGASSEIKDEGEAAEVKQNSLKSTWSTDITKQLSKIKHNVLGLYE 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02450 1282 Gene3D Ribonuclease Inhibitor 334 487 IPR032675 -
Car07g02450 1282 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 672 IPR044974 GO:0006952
Car07g02450 1282 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 678 842 IPR044974 GO:0006952
Car07g02450 1282 PANTHER ARCHAEAL ATPASE 678 842 - -
Car07g02450 1282 PANTHER ARCHAEAL ATPASE 1 672 - -
Car07g02450 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 230 IPR027417 -
Car07g02450 1282 Coils Coil 1164 1198 - -
Car07g02450 1282 SUPERFAMILY L domain-like 343 699 - -
Car07g02450 1282 Coils Coil 1129 1149 - -
Car07g02450 1282 PRINTS Disease resistance protein signature 1 16 - -
Car07g02450 1282 PRINTS Disease resistance protein signature 78 92 - -
Car07g02450 1282 PRINTS Disease resistance protein signature 171 185 - -
Car07g02450 1282 PRINTS Disease resistance protein signature 463 479 - -
Car07g02450 1282 SUPERFAMILY "Winged helix" DNA-binding domain 206 312 IPR036390 -
Car07g02450 1282 Coils Coil 1213 1240 - -
Car07g02450 1282 Pfam NB-ARC domain 1 219 IPR002182 GO:0043531
Car07g02450 1282 Gene3D Ribonuclease Inhibitor 488 724 IPR032675 -
Car07g02450 1282 Gene3D - 136 220 IPR042197 -
Car07g02450 1282 Gene3D - 1 132 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02450 Car-Chr7 45546477 45554935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02450 2 568 WRKY Transcription Factor Family AT4G12020 33.503 2.82e-67 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02450 - - mtr:MTR_8g042660 1978.76