Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02432 ATGGGACATGGAACAAGAAAACTCTCAGATGAATATGATGTTTCAGAAATTCTAGGAAGAGGTGGATTTTCTGTTGTTAGAAAAGGTACAAAAAAATCAAGCAATGATGAAAAATCAGCACAAGTAGCAATAAAAACACTAAGAAGATTAGGCACATCAAATAGTCCTAGTGGAATACCAAGAAAAAAATTATCAGGTGGAGAGAAGAGCACAGTAACTATGAGACAAGTTTCAGTCTCAGATACTTTGTTAACAAATGAGATTCTTGTAATGAGAAGAATAGTTGAAAATGTTTCACCACATCCAAATGTGATTGATCTTTATGATGTTTATGAGGATTCAAATGGTGTTCATCTTATTCTTGAGCTTTGTAGTGGTGGTGAACTTTTTGATAGGATTGTTGCACAAGATAAGTATAGTGAGACTGAAGCTGCAACTGTTGTTCATCAGATTGTAGCTGGATTAGAGGCTATTCATAGAGCTAACATTGTTCATAGAGATTTGAAGCCTGAAAATTGTCTTTTTTTGGATGTTAGGAAAGATTCACCTCTTAAGATTATGGATTTTGGGTTGAGTTCTGTTGAGGAATTTACTGACCCTGTTGTTGGTTTGTTTGGATCTATTGATTATGTTTCACCTGAGGCTCTTTCTCAAGGGAAAATCACTACTAAGAGTGATATGTGGTCTCTTGGAGTCATTCTTTATATCTTACTTTCTGGGTATCCACCTTTCGTTGCTCAAAATAATCGCCAAAAGCAACAAATGATAATTAATGGGAATTTTAGTTTTTATGAGAAAACTTGGAAGGGAATTTCCCAATCAGCAAAGAATTTGATTTCAAGTCTTCTTACTGTTGATCCTAGTAAGAGACCTAGTGCTCTAGAGCTTCTAAGTGATCCATGGGTCAAAGGTGAGAAAGCAAAAGATGATCAAATGGACCCTGAGATTGTGTCAAGGCTACAAAGCTTTAATGCAAGACGCAAACTTCGTGCAGCTGCAATTGCTAGTGTTTGGAGTTCCTCAATCTTCCTAAGAACCAAAAAATTGAGATCCTTGATTGGATCCTACGATCTCAAAGAAGACGAAATTGAAAATCTCAGGATACATTTCAAGAACATATGTGCAAATAGAGACAATGCTACTCTATGTGAGTTTGAGGAGGTGTTAAAAGCAATGAATATGCCATCATTGATTCCTTTTGCACCTCGTATATTTGACTTATTTGACAACAACCGTGATGGAACAGTTGACATGAGAGAGTTACTTTGTGGATTTTCCAGTCTCAAGAATTCCAAAGGAGAGGATGCTCTCCGTTTGTGCTTTCAGATGTATGACACAGATAGATCTGGGTGCATCTCCAAAGAAGAAGTAGCATCTATGCTCAGAGCTTTGCCATATGATTGTCTTCCAACTGATATCACTGAACCTGGAAAATTGGATGAGATATTTGACTTAATGGATGCCAATAGTGATGGAAAAGTTACCTTTGATGAATTCAAAACTGCTATGCAAAGAGATAGCTCCCTCCAAGATGTAGTTCTCTCTTCTCTTCGACCATAA 1560 0.3679 MGHGTRKLSDEYDVSEILGRGGFSVVRKGTKKSSNDEKSAQVAIKTLRRLGTSNSPSGIPRKKLSGGEKSTVTMRQVSVSDTLLTNEILVMRRIVENVSPHPNVIDLYDVYEDSNGVHLILELCSGGELFDRIVAQDKYSETEAATVVHQIVAGLEAIHRANIVHRDLKPENCLFLDVRKDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILYILLSGYPPFVAQNNRQKQQMIINGNFSFYEKTWKGISQSAKNLISSLLTVDPSKRPSALELLSDPWVKGEKAKDDQMDPEIVSRLQSFNARRKLRAAAIASVWSSSIFLRTKKLRSLIGSYDLKEDEIENLRIHFKNICANRDNATLCEFEEVLKAMNMPSLIPFAPRIFDLFDNNRDGTVDMRELLCGFSSLKNSKGEDALRLCFQMYDTDRSGCISKEEVASMLRALPYDCLPTDITEPGKLDEIFDLMDANSDGKVTFDEFKTAMQRDSSLQDVVLSSLRP 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02432 519 CDD EFh 437 504 IPR002048 GO:0005509
Car07g02432 519 SMART serkin_6 12 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02432 519 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Car07g02432 519 CDD EFh 403 462 IPR002048 GO:0005509
Car07g02432 519 SUPERFAMILY EF-hand 346 510 IPR011992 -
Car07g02432 519 PANTHER CALCIUM AND CALCIUM/CALMODULIN-DEPENDENT SERINE/THREONINE-PROTEIN KINASE 12 504 - -
Car07g02432 519 Pfam Protein kinase domain 12 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02432 519 Pfam EF hand 405 421 IPR002048 GO:0005509
Car07g02432 519 Gene3D Phosphorylase Kinase; domain 1 5 130 - -
Car07g02432 519 SUPERFAMILY Protein kinase-like (PK-like) 7 323 IPR011009 -
Car07g02432 519 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Car07g02432 519 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Car07g02432 519 PRINTS Recoverin family signature 404 425 - -
Car07g02432 519 PRINTS Recoverin family signature 428 447 - -
Car07g02432 519 PRINTS Recoverin family signature 494 514 - -
Car07g02432 519 ProSiteProfiles Protein kinase domain profile. 12 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02432 519 Gene3D Transferase(Phosphotransferase) domain 1 131 345 - -
Car07g02432 519 SMART efh_1 436 464 IPR002048 GO:0005509
Car07g02432 519 SMART efh_1 400 428 IPR002048 GO:0005509
Car07g02432 519 SMART efh_1 478 506 IPR002048 GO:0005509
Car07g02432 519 CDD STKc_CAMK 12 301 - -
Car07g02432 519 ProSiteProfiles EF-hand calcium-binding domain profile. 474 509 IPR002048 GO:0005509
Car07g02432 519 ProSitePatterns Protein kinases ATP-binding region signature. 18 45 IPR017441 GO:0005524
Car07g02432 519 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 504 - -
Car07g02432 519 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Car07g02432 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Car07g02432 519 Gene3D - 346 513 - -
Car07g02432 519 MobiDBLite consensus disorder prediction 51 70 - -
Car07g02432 519 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Car07g02432 519 Pfam EF-hand domain pair 435 504 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02432 Car-Chr7 44823250 44828261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02432 3 505 EF-hand Containing Proteins AT5G23580 32.742 1.64e-76 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Car07g02432 Pkinase 1.6e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02432 K13412 - gmx:732616 880.167