Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02428 ATGAAGAGGTCGCCACCATCTTCAAGTTCATCATCTTCATCTTCTGTTGGATTTGAGACACAAATTCAATCAGAGAAAAAAAGGGGTGCTAAGAATCCAAAAAAGAATCTTAGTGTCAAGTCACAGAATTGCAAACAGAAGAAGAACCAAACAAATGGTGGGAGTAGAAGAAGCTCCATTTACAGAGGAGTTACAAGACATAGATGGACTGGGAGATTTGAAGCTCATCTATGGGATAAGAGTTCTTGGAACAACATTCAGAGCAAGAAGGGACGACAAGTTTATTTGGGTGCTTATGATACTGAAGAAGCAGCAGCTCGTACCTATGATCTTGCAGCACTTAAGTATTGGGGGAAGGATGCAACCTTGAATTTTCCGATAGAAACATATGGCAAAGAGGTGGAGGAAATGGACAAGATCTCAAGAGAAGAGTATTTGGCTTCTTTGCGGCGTCAAAGCAGTGGTTTTTCTAGAGGCATTTCCAAATACCGTGGGGTTGCTAGGCATCACCATAATGGTCGCTGGGAAGCTCGCATTGGAAGAGTTTGTGGTAACAAGTACCTCTACTTAGGAACTTACAAAACTCAAGAGGAGGCAGCGAAGGCATATGACATAGCAGCAATAGAACATAGAGGATTAAATGCGGTAACGAATTTCGACATCAGCAATTACATCAATAAATTTAAGAACAAAATCGATGAATCGGAACAAACACAACCTCAAACAACAACCATAGAAATTGTTCAAAATTCCTCTGACTCCGAAGTAGCACAAGAAGAACAACAACAAATAACAATTACTACTACACCTCCACAAGAAATTTTAGAAAAAATTGAAGTACCAATGCTGcatcaacaacaacaacaacaacaTGTTCCTCCAATTGAACAAGAACACACAATAGTTAATGTTATGGATCATTATCTTGAACAAGATCTACCATCAAGTTTCATGTTTCAAGACTCAGATGAATTGGCTTTGAGCAATGCTGAGATAGATTTAATGCAAATATTTGATGGTTCTAGCTTTGAAGATAACATTGATTTGTGGTTCAATACAGATCCTGGTTTTGATAGTGATATCAATATAAGTGAAGTTTTGGAGGGTATTAATTGTGGTGGATTATTAAATGGAGATGCTGGAAATAACATGATAGTGGATGGtaacaataataataatattaaaaacaaggagaataaGGAAATATTATCCTTAAATTCTTCTTCATCTTCTTCACTATCATCTACAACAACAATAGATTATTTGTAA 1269 0.3578 MKRSPPSSSSSSSSSVGFETQIQSEKKRGAKNPKKNLSVKSQNCKQKKNQTNGGSRRSSIYRGVTRHRWTGRFEAHLWDKSSWNNIQSKKGRQVYLGAYDTEEAAARTYDLAALKYWGKDATLNFPIETYGKEVEEMDKISREEYLASLRRQSSGFSRGISKYRGVARHHHNGRWEARIGRVCGNKYLYLGTYKTQEEAAKAYDIAAIEHRGLNAVTNFDISNYINKFKNKIDESEQTQPQTTTIEIVQNSSDSEVAQEEQQQITITTTPPQEILEKIEVPMLHQQQQQQHVPPIEQEHTIVNVMDHYLEQDLPSSFMFQDSDELALSNAEIDLMQIFDGSSFEDNIDLWFNTDPGFDSDINISEVLEGINCGGLLNGDAGNNMIVDGNNNNNIKNKENKEILSLNSSSSSSLSSTTTIDYL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02428 422 SUPERFAMILY DNA-binding domain 59 128 IPR016177 GO:0003677
Car07g02428 422 SUPERFAMILY DNA-binding domain 161 222 IPR016177 GO:0003677
Car07g02428 422 ProSiteProfiles AP2/ERF domain profile. 162 220 IPR001471 GO:0003700|GO:0006355
Car07g02428 422 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 384 - -
Car07g02428 422 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Car07g02428 422 PRINTS Ethylene responsive element binding protein signature 202 222 IPR001471 GO:0003700|GO:0006355
Car07g02428 422 ProSiteProfiles AP2/ERF domain profile. 60 126 IPR001471 GO:0003700|GO:0006355
Car07g02428 422 MobiDBLite consensus disorder prediction 1 60 - -
Car07g02428 422 Pfam AP2 domain 60 118 IPR001471 GO:0003700|GO:0006355
Car07g02428 422 Pfam AP2 domain 161 211 IPR001471 GO:0003700|GO:0006355
Car07g02428 422 SMART rav1_2 60 132 IPR001471 GO:0003700|GO:0006355
Car07g02428 422 SMART rav1_2 162 226 IPR001471 GO:0003700|GO:0006355
Car07g02428 422 Gene3D AP2/ERF domain 60 128 IPR036955 GO:0003700|GO:0006355
Car07g02428 422 Gene3D AP2/ERF domain 161 222 IPR036955 GO:0003700|GO:0006355
Car07g02428 422 MobiDBLite consensus disorder prediction 35 59 - -
Car07g02428 422 CDD AP2 161 222 IPR001471 GO:0003700|GO:0006355
Car07g02428 422 MobiDBLite consensus disorder prediction 1 22 - -
Car07g02428 422 CDD AP2 59 127 IPR001471 GO:0003700|GO:0006355
Car07g02428 422 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 1 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02428 Car-Chr7 44735094 44740544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02428 15 224 AP2-EREBP Transcription Factor Family AT5G57390 64.286 1.88e-88 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Car07g02428 AP2 5.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02428 - - gmx:100789774 476.092