Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02424 ATGGAGGTTGATGAAAAGAGATTGTCTCTTGGTTCATCCAATATTGTACTTAGAGGATGTGAACTTAAGAATACTAATTGGGCGGTTGGTGTTGCCGTGTATTGTGGTTGCGAGACTAAAGCTATGCTCAACAATTCGGGTGCTCCTTCTAAGAGGAGCCGTCTTGAGACTCAGATGAACTCTGAGATCATTATGCTTTCTTTCTTTCTTGTAGCTTTGTGTATAGTCACTTCAGTTTGCGCTGCTGTTTGGTTAAAGCGAAACAAGAAGGAGTTGAATCTATTGCCTTATTATAGGAAACTCGATGTTTCAAAGGGAAAAGAGGAAAGCTATCAATATTATGGATGGGGAGTGGAAATTCTTTTCACGTTCCTCATGTCGGTTATAGTGTTCCAGGTCATGATCCCTATATCGTTGTACATTTCAATGGAGCTTGTCCGTGTTGGTCAGGCCTACTTCATGATCAAAGACTCCAGATTGTATGATGAGGCAACCAATTCAAGATTTCAGTGTAGGGCCTTGAATATCAATGAAGATTTAGGGCAAATTAAATATATCTTTTCGGACAAAACTGGTACACTAACTGAGAACAAGATGGAGTTTCAATGCGCGAGTATCTGGGGTGTTGATTACAGTTCTGGAAAAGCCGGTCTTGAGAATGAGCAAGATGAATACTCTCTTCAAGTTGATGGAAAGGTCTTGAAGCCAAAGATGAAGGTGAAAGTTAATCAAGAGCTTTTGCGATTATCAAAAAATGGATTTGCAAACGAAGATGGAAAATGGATTTATGATTTCTTTCTTGCATTGGCAGCATGTAATACTATTGTGCCTCTTGTTGTTGACACATCTGACCCTACAGTCAAGCTGATAGATTATCAAGGCGAATCACCTGATGAACAAGCATTGACATATGCTGCTGCTGCCTATGGTTTTATGCTTATAGAACGAACCTCAGGTCACATAGTCATTGATATTCATGGTGAAAGACAAAGGTTCAATGTATTGGGTTTGCACGAATTTGACAGTGATCGAAAAAGGATGTCGGTTATATTGGGGTGCAGTGACAATTCAGTGAAACTCTTTGTCAAAGGGGCGGATACATCAATGTTTAGTGTGATCAATAAATCATTGAACACAGCCGTAATACAAGCAACTGAAACCCATCTTCAATCTTATTCTTCTGTCGGTTTGAGGACGCTTGTTATTGGGATGCGTGACTTGAATCCTTCGGAATTTGAGCAATGGCACTTTGCCTTTGAGGCAGCAAGTACTTCTTTGATTGGTAGGGCTGCTTTGCTTCGCAAGGTTGCTACCAATGTAGAGAATAACCTATGCATATTGGGCGCTACCGCTATTGAAGATAAACTGCAGCAAGGAGTGCCCGAATCTATTGAGTCTCTAAGGAAAGCCGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAGGAAACTGCCATATCGATTGGCTATTCGTCAAAGTTACTAACAAGCAGCATGACTCAAATTAGAATTAAGAGCAATAATCGAGCGTCATGTCAAAGAGATTTACAAGATGCACTTATGACGTCTAGAAAAAACATGGCTGCACGTGAGGTTGGCAACTATTTTGAAGGAAGTTCTGACGCTGATGCTGTTTTGACTCCGATGGCCTTGATTATTGACGGGACTAGCCTTGTATATATTCTTGACAGCAAACTTGAAGAAGAGCTCTTTGAACTCTCACGTAGATGTTCTGTTGTTCTATGTTGTCGTGTGGCTCCATTGCAAAAGGCCGGGATTGTCTCTCTTGTCAAGAATAGGACGTCCGACATGACTTTAGCCATTGGAGATGGTGCTAACGATGTATCGATGATCCAAATGGCTGATGTTGGTGTTGGCATCAGTGGGCAGGAGGGTAGACAAGCTGTTATGGCTTCAGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTCTTATTCGTACACGGACACTGGAATTACCAACGGCTAGGCTACATGGTTCTATACAATTTTTACCGAAATGCTGTCTTTGTTCTAATTCTATTTTGGTATGTGCTCTTCACTGCTTTCACTTTGACAACTGCTATAAATGAATGGAGCAGCATGTTGTATTCAATAATTTACACTGCAGTGCCAACTATTGTTGTCGGTGTTCTCGACAAGGATCTTAGCAAAAGAACTCTCCTAAATAACCCGCAGCTTTACGGGGCCGGACAAAGAGAAGAGGCCTACAACAAAAAATTGTTTTGGTTGACGATGGCAGATACTTTATGGCAGAGTGTTGTCGTCTTCTTCGCTCCTCTCTTCGCATATTGGGGAAGCACTGTTGATGTAGCAAGCATAGGGGATCTTTGGACTCTTTCGGTAGTTATTTTGGTTAATTTGCACTTGGCCATGGACGTAATTAGGTGGAGTTGGATTACTCATGCATCCATTTGGGGGTCTGTCATTGCAACTTTCATATGTGTCGTGATTATTGATGCTATACCGGCACTTCGTGGTTATTGGGCTATCTTCGATGCAGCAGGCACCGCATTATTCTGGTTATGTTTGCTTGGAATACAAATAGCAGCATTGCTTCCACGCTTCGTGGTAAAATTTGTTTATCAATATTATTGTCCGGACGATATTCAGATTTCAAGAGAAGTTGAGAAGTTTAGGACTCTAAGGGTCAATGGAGGTGAACAAACAGAAATGCTTCACATCACAAATGGTCCACAAAGATAA 2730 0.4132 MEVDEKRLSLGSSNIVLRGCELKNTNWAVGVAVYCGCETKAMLNNSGAPSKRSRLETQMNSEIIMLSFFLVALCIVTSVCAAVWLKRNKKELNLLPYYRKLDVSKGKEESYQYYGWGVEILFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIKDSRLYDEATNSRFQCRALNINEDLGQIKYIFSDKTGTLTENKMEFQCASIWGVDYSSGKAGLENEQDEYSLQVDGKVLKPKMKVKVNQELLRLSKNGFANEDGKWIYDFFLALAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALTYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCSDNSVKLFVKGADTSMFSVINKSLNTAVIQATETHLQSYSSVGLRTLVIGMRDLNPSEFEQWHFAFEAASTSLIGRAALLRKVATNVENNLCILGATAIEDKLQQGVPESIESLRKAGIKVWVLTGDKQETAISIGYSSKLLTSSMTQIRIKSNNRASCQRDLQDALMTSRKNMAAREVGNYFEGSSDADAVLTPMALIIDGTSLVYILDSKLEEELFELSRRCSVVLCCRVAPLQKAGIVSLVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFVHGHWNYQRLGYMVLYNFYRNAVFVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTAVPTIVVGVLDKDLSKRTLLNNPQLYGAGQREEAYNKKLFWLTMADTLWQSVVVFFAPLFAYWGSTVDVASIGDLWTLSVVILVNLHLAMDVIRWSWITHASIWGSVIATFICVVIIDAIPALRGYWAIFDAAGTALFWLCLLGIQIAALLPRFVVKFVYQYYCPDDIQISREVEKFRTLRVNGGEQTEMLHITNGPQR 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02424 909 CDD P-type_ATPase_APLT_Dnf-like 4 768 - -
Car07g02424 909 Gene3D - 443 648 IPR023214 -
Car07g02424 909 Gene3D - 288 422 IPR023299 GO:0000166
Car07g02424 909 SFLD p-type atpase 171 659 IPR044492 -
Car07g02424 909 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 908 - -
Car07g02424 909 SFLD Haloacid Dehalogenase 171 659 - -
Car07g02424 909 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 908 - -
Car07g02424 909 Gene3D - 167 183 - -
Car07g02424 909 PRINTS P-type cation-transporting ATPase superfamily signature 187 201 - -
Car07g02424 909 PRINTS P-type cation-transporting ATPase superfamily signature 608 627 - -
Car07g02424 909 Pfam Cation transport ATPase (P-type) 295 370 - -
Car07g02424 909 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 579 694 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car07g02424 909 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 4 882 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Car07g02424 909 SUPERFAMILY HAD-like 174 649 IPR036412 -
Car07g02424 909 PRINTS Sodium/potassium-transporting ATPase signature 685 705 - -
Car07g02424 909 PRINTS Sodium/potassium-transporting ATPase signature 180 201 - -
Car07g02424 909 ProSitePatterns E1-E2 ATPases phosphorylation site. 189 195 IPR018303 -
Car07g02424 909 SUPERFAMILY Calcium ATPase, transmembrane domain M 40 875 IPR023298 -
Car07g02424 909 Pfam Phospholipid-translocating P-type ATPase C-terminal 636 875 IPR032630 -
Car07g02424 909 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 193 459 IPR023299 GO:0000166
Car07g02424 909 Gene3D - 184 196 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02424 Car-Chr7 44617285 44623433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02424 1 909 Primary Pumps ATPases AT5G04930 68.462 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02424 K14802 - gmx:100784988 1521.14