Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02384 atgaacaaTGTTCGAGAGGTTCAATGGTCAATGGTCGATGATGTAATTCTCTTTGATAACTTTGTTAATGATTTTGCTCACTTGGGTCAACACGACAACAACATGGAGAACAATTTTGAGGTATATCATGATGCTACAATTTTTGAAGAAAATGGTGTGAATGATCAAGATTCTATTGAATGTGTTGCTACAACTATTGATGAAATAAATGAAATAAAAACAGAGTCTTCTTCAAATATTGAGTCAAATTCTATGTGTTGTATTTGTCTTGGAGACTTGTCAAATGGTTCAAAAATAATGGCTCAACCTTGTTCTCATGTATTTCACGGAGATTGTATTAATAAGTGGTTCAATGTTAGCAAGACATGTCCTCTATGTCGTAGGGCCATTCATTAG 396 0.3308 MNNVREVQWSMVDDVILFDNFVNDFAHLGQHDNNMENNFEVYHDATIFEENGVNDQDSIECVATTIDEINEIKTESSSNIESNSMCCICLGDLSNGSKIMAQPCSHVFHGDCINKWFNVSKTCPLCRRAIH 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02384 131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 131 IPR013083 -
Car07g02384 131 PANTHER GB|AAF27103.1 14 130 - -
Car07g02384 131 Pfam Ring finger domain 85 127 IPR001841 -
Car07g02384 131 SUPERFAMILY RING/U-box 65 130 - -
Car07g02384 131 SMART ring_2 86 126 IPR001841 -
Car07g02384 131 PANTHER TARGET OF ERK KINASE MPK-1 14 130 - -
Car07g02384 131 ProSiteProfiles Zinc finger RING-type profile. 86 127 IPR001841 -
Car07g02384 131 SMART ringv_2 85 127 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02384 Car-Chr7 42907529 42907924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02384 86 130 C3H Transcription Factor Family AT1G74620 56.522 7.69e-13 61.6