Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02382 atggaaagaATGTTTCCTTCAAAGAAGCCCTTAACTATGAATTCATCACATGAAAGACCTATGTGTGTTCAAGGTGACTCAGGCCTTGTCCTCACCACCGATCCGAAACCGCGGCTTCGATGGACCGTCGAACTCCATGAACGCTTCGTCGATGCTGTTGCTCAGCTTGGAGGGCCAGATAAAGCCACTCCTAAAACAATCATGAGAGTTATGGGTGTGAAGGGTCTTACCCTTTACCACCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAGCCCCACAAGGAATTCAATGAACAGTCGGTTAAGGATGGTATGAGAGTTTCGGCTTTTGAACTGCAGCGAAATACTGGCACCTCGTCTTCTATGACTGGCCGCAACATGAACGAGATGCAGATGGAGGTGCACAGAAGATTGCATGAACAACTAGAGGTTCAAAAGCACCTTCAATTGAGGATTGAGGCTCAAGGTAAATACATGCAAAGTATATTGGAGAAGGCTTATAGCACACTTGCTGGTGAAAACATGGCAGTTTCAGCTACAAATTTCAAGGGTGTTATTGGAACTCAAGGCACCCCTAATTTGAGTATCATGAAAGATTTTGTTTCTCCTCTTAATTATCCTCCTTTTCAAGACCTTAACATTTGTGGTAGTGATGATGAACAACTTGATCTTCATCATCACATCATAGAGAGGCCAACCCTTGATGAAATGCTTATGCCAAATAATAATGAAAATTTGTTTGTTGGGAAGAAAAGGCCTAGCCCTAATTTTAATGGAGGAAGTGGAAAGAGTCCATTGATTTGGAATGATAATGATTTAAGGCTTCATGATTTGGGAACAGCTTCATCATCCATTAGTCCTCAAGATGTTCCTAATTTTAAAGGTGATGATGAAAGTGATATTATATATGACACAAAGGTTGGTGAGAAGAAATTTGATGCATCAATGAAGCTAGGAATATCATCACCGAGTAGAGTAACTTTTCAAAGTGAAAGGATGAGTCCTATGATCAATGTTGTGGCAGGTCATAGCTCATCACCATTTGGTTGA 1056 0.4091 MERMFPSKKPLTMNSSHERPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEQSVKDGMRVSAFELQRNTGTSSSMTGRNMNEMQMEVHRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYSTLAGENMAVSATNFKGVIGTQGTPNLSIMKDFVSPLNYPPFQDLNICGSDDEQLDLHHHIIERPTLDEMLMPNNNENLFVGKKRPSPNFNGGSGKSPLIWNDNDLRLHDLGTASSSISPQDVPNFKGDDESDIIYDTKVGEKKFDASMKLGISSPSRVTFQSERMSPMINVVAGHSSSPFG 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02382 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 93 IPR017930 -
Car07g02382 351 MobiDBLite consensus disorder prediction 1 20 - -
Car07g02382 351 Pfam MYB-CC type transfactor, LHEQLE motif 132 170 IPR025756 -
Car07g02382 351 Gene3D - 35 93 - -
Car07g02382 351 Pfam Myb-like DNA-binding domain 39 87 IPR001005 -
Car07g02382 351 SUPERFAMILY Homeodomain-like 35 91 IPR009057 -
Car07g02382 351 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 288 - -
Car07g02382 351 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 288 IPR044848 GO:0003700
Car07g02382 351 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 36 91 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02382 Car-Chr7 42809458 42812972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02382 4 351 G2-like Transcription Factor Family AT1G79430 56.403 2.81e-118 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car07g02382 Myb_DNA-binding 4.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02382 - - gmx:100796268 454.521