Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02362 ATGCCTGATGATTTGCCTCAAATGAGTAACAACATTTTATCAGAAGAAGCTCAGAAGACAGATCAAAGTTGTTCAAATGATCATCATACAGAAAGTGATGATGCTAGAAAGTTGAATAATAATCAAGATGGTATAAAAAATAACAATACAAACAATGTAGCTGAACAAAACAACAACATAGACCAAAATTCTAAAAACAATGCAAAGAAGAACACAAGTAGTAATAATAAACCACTATCATCATCAAGGCCTCAAAAGTTAGAATCACTTATGAGGAATTTCTCTGAATTTTCCACTACTCAAAGACCAAGTCCAAGTCCACATTCAAGAACCCCTTCAAATTCAGACATATTATCAGGGGTAACAAGGGGATTTCCAGCACAACAAACAAAGACTAGTGGTACTAGTTCACGTAGTGATAGTCTAGAGAGCACAAGTAGTGCATCACATATTAAGCCACATACAGGAGGTGATGTTAGATGGGATGCAATCAACGTTGTTTCAAGAGGGTGTAATTCAAGTCTTAACCTTAGTCATTTTAAGCTCGTGAAGCGTGTCGGGTATGGTGACATTGGAAGTGTGTACCTTGTTGAGCTTAAAGGGACAGGTACATTCTATGCTATGAAAGTGATGGATAAGGCTTCTCTTGCTAGTAGGAATAAACTTCTTAGAGCACAAACTGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCAACTTTGTATTCTTATTTTGAAACTGAAAAGTATTACTGTTTGGTTATGGAATTCTGTAGTTGTGGTAGTTTGCATTCCTTGAGATTGAGGCAACCCAACAAGCATTTCACTGAAGAAGCTGCAAGGTTTTACTGTTCAGAGATTTTAGTAGCACTGGAGTACCTCCACATGTTAGGAATAGTATACAGAGACTTAAAACCAGAAAACGTTCTAGTCCGTGACGAAGGCCACATAATGCTCTCAGATTTCGACTTATCCCTCCGCTGTTCCGTCAATCCAACACTCGTCAAATCCTCCTCCGCCCACGTAACCACCACCTCCTCCGCAATCCTCGACGACGAACACGTCGTCTACGGTTGCATGCAACCTTCAAGTTTCTTCTTCCCACGTATCCTCCCTTCAAAAAAGAACCGAAAATCAAAATCAGATTTCGGCCTTGTACGACTTCCAGAACTGATGGCGGAACCAACGAACGTCAAATCAATGTCGTTCGTCGGAACCCACGAGTATCTGGCTCCGGAAATCGTGCGTGGCGAAGGACACGGAAGTGCTGTTGATTGGTGGACGTTTGGCATATTTTTATACGAACTTTTATATGGAACGACGCCGTTTAAAGGTAATGGGAACCGTGCTACGCTTTTTAATGTTGTGGGACAGCCTTTAAGGTTTCCTGAGAATCCTTCTTGTAGTGCTGTGGCTAGGGATCTTATTAAAGGGTTGTTGGTTAAAGAGCCTCATAAAAGAATTGCTTATAAAAGAGGTGCTACTGAGATTAAACAACATCCTTTTTTTGAAGGGGTTAATTGGGCTTTGATTAGAAGCTCTACGCCTCCTATTATTCCTGAATTGTTCGATTTTTCTCAGTATGTTAGTAAGGAAACTGTTGATAAGAAGATTGCAGAAATTGCTACTGataataataataataacaataataataataataGTAAGACGCAGCAGCAAGATGATTCTTCTTATGAAGATTTTGAGTATTTTTAG 1722 0.3926 MPDDLPQMSNNILSEEAQKTDQSCSNDHHTESDDARKLNNNQDGIKNNNTNNVAEQNNNIDQNSKNNAKKNTSSNNKPLSSSRPQKLESLMRNFSEFSTTQRPSPSPHSRTPSNSDILSGVTRGFPAQQTKTSGTSSRSDSLESTSSASHIKPHTGGDVRWDAINVVSRGCNSSLNLSHFKLVKRVGYGDIGSVYLVELKGTGTFYAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETEKYYCLVMEFCSCGSLHSLRLRQPNKHFTEEAARFYCSEILVALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHVTTTSSAILDDEHVVYGCMQPSSFFFPRILPSKKNRKSKSDFGLVRLPELMAEPTNVKSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLYGTTPFKGNGNRATLFNVVGQPLRFPENPSCSAVARDLIKGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALIRSSTPPIIPELFDFSQYVSKETVDKKIAEIATDNNNNNNNNNNSKTQQQDDSSYEDFEYF 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02362 573 SMART serkin_6 180 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02362 573 Gene3D Phosphorylase Kinase; domain 1 178 263 - -
Car07g02362 573 CDD STKc_phototropin_like 178 524 - -
Car07g02362 573 Gene3D Transferase(Phosphotransferase) domain 1 264 334 - -
Car07g02362 573 ProSiteProfiles AGC-kinase C-terminal domain profile. 506 573 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car07g02362 573 Pfam Protein kinase domain 383 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02362 573 Pfam Protein kinase domain 181 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02362 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Car07g02362 573 MobiDBLite consensus disorder prediction 21 40 - -
Car07g02362 573 MobiDBLite consensus disorder prediction 41 152 - -
Car07g02362 573 PANTHER FLIPPASE KINASE 1-RELATED 25 573 - -
Car07g02362 573 MobiDBLite consensus disorder prediction 1 154 - -
Car07g02362 573 ProSiteProfiles Protein kinase domain profile. 180 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02362 573 MobiDBLite consensus disorder prediction 545 567 - -
Car07g02362 573 Gene3D Transferase(Phosphotransferase) domain 1 383 523 - -
Car07g02362 573 SUPERFAMILY Protein kinase-like (PK-like) 177 535 IPR011009 -
Car07g02362 573 MobiDBLite consensus disorder prediction 545 573 - -
Car07g02362 573 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 25 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02362 Car-Chr7 41920428 41924433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02362 84 573 AGC Kinase Gene Family AT1G79250 64.603 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car07g02362 Pkinase 3.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02362 - - gmx:100802478 714.146