Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02357 ATGAATGGTGCAAGCGACGGGGTGTATGGATCAACATCTGGATTGAAAGATAATCTGTTTATTGAACTTTGGCATGCATGTGCTGGATCCATTTATATCCCCAAACTTTGGGACAAGGTTTTCTACTTCCCTCAAGGACACTTAGAGCAGATTGCTATACTTACTCGAGATCAACAAGATGGTCACTACAAGGAAACTCCTCTACAGATCATGCCTTCTAAGATCTTGTGTATAGTTATCGGTGTTCAATTAAAGGTGGAGGATAACACAGATGAAGTTTTTGCACTAATTACTTTATTTCCATTGGGTGAGCCACAAGAACTTGTCTTAGAGGATAATCAAGCAATTCAAAATCCTAGCGAATTATACTCTTTTAGCAAGATACTCACTTCAATGGAAACAAGTAAACATGGTGCATTTTCTATTCCAATGCAACATGCTGAGAAGTGCTTCCACCCACTGGATATGACTCTTCAACCACCAACACAAGATTTAGTGGCGAAGGACATGCATGGAATTGAGTGGAATTTTCGACATATATTTCACAGCCATCCGAGAGAACATTTGCTTACTAGTGGTTGGAACATGTTTGTGAATTCCAAAAAGCTTCTTCCTGGAGATTCATGCATTTTTGTCAGTGAAGAGAATGGTGAAATTGGTATTGGAATTCGTCGAGGGATGAATCAACAGAGCAATATCTCCACAACATTGTCTCAACTATCAACTCAAACCATGCCATTTCAATCATTACTTACTGCTGCTCATGCTGTTACTACAAACACTATGTTCCTTGTCAAGTACCATCCTTGGACTAGTCCTTTCGAATTTATGGTTCCTCTAAATACTTATATTGAGTCAACTCAAAAAGACTACTCAATTGGAACGAGGGTACACATGATCTTTGATGCTGAAGGAAGTGCAAGAAGGTATGGTACAATAGTTGGTAATGAAGATATTGATCCCATTGTGTGGCCTGGTTCAGAATGGAGATGTATCAAGGTGCAATGGGATTCCATGCTAAATCCTTGTACTTATCCTGAAAGAGTTTGTCCATGGTGGATTGAACCACTGGGATCTTCAAATTTAAAGGGCTATCCTAATCTCCCTTTACAAAACAAGGAACATGTGCAAAACCCACTTGGGTTAAATGGCTTTGCTAATGATGATATGGCTGGGAGTTCATTCAAACGTGAATATCACAAAGTGGATATGGACTTACAAGGTTATCGTTACAAAACTGGAAATGATGAAAAATCAAAAatatttatttttgcattttttatctttctttgcctttttatattttttatttttatctttcGCCCCCGTATGTAA 1335 0.373 MNGASDGVYGSTSGLKDNLFIELWHACAGSIYIPKLWDKVFYFPQGHLEQIAILTRDQQDGHYKETPLQIMPSKILCIVIGVQLKVEDNTDEVFALITLFPLGEPQELVLEDNQAIQNPSELYSFSKILTSMETSKHGAFSIPMQHAEKCFHPLDMTLQPPTQDLVAKDMHGIEWNFRHIFHSHPREHLLTSGWNMFVNSKKLLPGDSCIFVSEENGEIGIGIRRGMNQQSNISTTLSQLSTQTMPFQSLLTAAHAVTTNTMFLVKYHPWTSPFEFMVPLNTYIESTQKDYSIGTRVHMIFDAEGSARRYGTIVGNEDIDPIVWPGSEWRCIKVQWDSMLNPCTYPERVCPWWIEPLGSSNLKGYPNLPLQNKEHVQNPLGLNGFANDDMAGSSFKREYHKVDMDLQGYRYKTGNDEKSKIFIFAFFIFLCLFIFFIFIFRPRM 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02357 444 PANTHER AUXIN RESPONSE FACTOR 11 417 - -
Car07g02357 444 SMART B3_2 125 227 IPR003340 GO:0003677
Car07g02357 444 Pfam Auxin response factor 253 333 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Car07g02357 444 Gene3D - 290 362 - -
Car07g02357 444 Gene3D - 122 227 IPR015300 -
Car07g02357 444 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 11 417 IPR044835 GO:0003677|GO:0006355|GO:0009725
Car07g02357 444 SUPERFAMILY DNA-binding pseudobarrel domain 120 225 IPR015300 -
Car07g02357 444 Pfam B3 DNA binding domain 125 225 IPR003340 GO:0003677
Car07g02357 444 CDD B3_DNA 124 225 IPR003340 GO:0003677
Car07g02357 444 ProSiteProfiles B3 DNA-binding domain profile. 125 227 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02357 Car-Chr7 41683952 41695286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02357 19 356 B3 DNA Binding Superfamily AT5G62000 48.980 5.21e-110 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Car07g02357 B3 1.4e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02357 - - cam:101505502 861.292