Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02353 ATGCCATTCTCCTATGCAAAGAAATTTTTCAAGAGATTTTGGGTTGATGAATTCCAAACTGGAAATTTTCCAAGCAGCTTTCTGTCTAATGATATCTTGCCATCCCTTGGAGCAAGAATCAACCAAGAAACAAGATTGAGAAAATACATAATCTCTCCCTTCAATCCAAATTATCGGGCTTGGGATATGTTATTGATAATTCTAGTAATTTACTCTGCATGGATATGCCCATTTGAGTTTGGTTTTCTATCATATAAGCAAGATACACTATTCATCATAGATAACATTGTGAATGCCTTTTTTGCCATTGACATAGTCATGACATTCTTTCTTGCATATCTTGATGTCCATTCTTACCTTCTCATTGATGATCCTAAGAGAATTGCAGCCAGGTACCTATGTACCTGGTTTCTCTTGGATGTTTCTTCAACTGCACCACTTCAATCCATCATCTCTATCTTCACTGATCATAGCGGCGAGATTGGTTTCAAAGTTCTTAACATGCTTCGGTTATGGCGTCTTAGACGAGTCAATTATCTCTTTGCAAGACTTGAGAAAGACATTCGCTTCAATTACTTTTGGACTAGGTGCACAAAGCTTATTTCTGTGACATTGTTTGCTGTACACTGTGCTGGATGCATTAACTATTTAATTGCAGTAAGGCACCCTGATTTAAAAAGGACATGGATTGGTTCTGCGTACCCAAATTTTAAAGAAATGAGTCTTTGGGATAGATATGTGATATCAATGTATTGGTCTATTGTCACACTCACTACAACTGGCTATGGTGATTTGCATGCTGAAAACACTAAGGAGATGCTGTTTGATATCTTTTACATGTTGTTCAACTTGGGATTAACAGCATATATCATTGGGAATATGACAAACCTTGTTGTTCAATGGACAAGCCACACAAGAAGCTTTAGAGATACAATTAGAGCAGCTTCAGAATTTGCATCAAGAAACCATCTGCCTCATGATATACATGCTCAAATATTATCACATTTATGTCTAAGGTTCAAAACAGATGGATTAAAGCAGCAAGAAACAATAAATGGCATGCCAAAAGCAATTCGTTCAAGCATTGCACACCATCTATTTTTTCCTGTTCTGCAGAATGCTTACCTCTTCCAAACAGTTTCACATGACTTCCTTTTTCAATTGGTTACAGAAATGGAAGCTGAGTATTTTCCACCTAAAGAAGATGTTATACTACAAAATGAGTCTCCAACAGACCTTTACATCTTGGTTTCAGGGGCAGTGGATCTCATTCACAATGTGGATGGTCACGATCAAGTTTTGAAGAAGGCAACTGCAGGAGATACATTTGGAGAGATTGGAGTTTTATACAATAGACCACAGTGTGTCACTGTTAGGACCACAGAGCTTTCACAAATTTTAAGACTTAGCAGAACTTCATTGATGAATGCCATGCATGCAAATCCAGAAGCAGCAAAAATTATCATGACAAATCTTTTTAGGATGTTAAAAGGACAAGAAGATTTGGGTTATGAATATCCACCTATAGACACTAGATTGGCTATTCATGATGAAAACAACACAATGGGAAATTCTTGTCATACATGTTCAAAAAACTCACATGAGGAAGCTACATTGCATGACATGATACCAGCGTTGGTTGAAAATCAGCCAGAAAAAGAAGCAAATGAAAAGAACCTAAGTCCTGTTAGATGGAAACAGAAAGCTCTAGTTGACAAGCAACAAAACAAGAGTCTTGAAAATGGAAAAACATTAGATGAACATAAAATAGAGTTTGTGGAGACAGGTATAGTTAGTCAAGCTAGGAGTGACCAAATTTTATTAGAAAAAAGTAATCATTCATCTGAGAGAAAAAAAATAATATCTGTCAATAAGAGAGTTACCATACACTATCGAGGACAACATGGAAAGCTGATAATTCTGCCTGATTCATTGGAAGAGCTGCTCAAGATTGCAGGAGAAAAGTTTGGAGCGTCAAAGCCTACAAAAATAATAAATGCAGAGAATGCAGAGATAGATGACTTGTGTGTCATTCGAGATGGTGATCATCTGTTTTTCCTTTGTAATGAGTGA 2073 0.3666 MPFSYAKKFFKRFWVDEFQTGNFPSSFLSNDILPSLGARINQETRLRKYIISPFNPNYRAWDMLLIILVIYSAWICPFEFGFLSYKQDTLFIIDNIVNAFFAIDIVMTFFLAYLDVHSYLLIDDPKRIAARYLCTWFLLDVSSTAPLQSIISIFTDHSGEIGFKVLNMLRLWRLRRVNYLFARLEKDIRFNYFWTRCTKLISVTLFAVHCAGCINYLIAVRHPDLKRTWIGSAYPNFKEMSLWDRYVISMYWSIVTLTTTGYGDLHAENTKEMLFDIFYMLFNLGLTAYIIGNMTNLVVQWTSHTRSFRDTIRAASEFASRNHLPHDIHAQILSHLCLRFKTDGLKQQETINGMPKAIRSSIAHHLFFPVLQNAYLFQTVSHDFLFQLVTEMEAEYFPPKEDVILQNESPTDLYILVSGAVDLIHNVDGHDQVLKKATAGDTFGEIGVLYNRPQCVTVRTTELSQILRLSRTSLMNAMHANPEAAKIIMTNLFRMLKGQEDLGYEYPPIDTRLAIHDENNTMGNSCHTCSKNSHEEATLHDMIPALVENQPEKEANEKNLSPVRWKQKALVDKQQNKSLENGKTLDEHKIEFVETGIVSQARSDQILLEKSNHSSERKKIISVNKRVTIHYRGQHGKLIILPDSLEELLKIAGEKFGASKPTKIINAENAEIDDLCVIRDGDHLFFLCNE 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02353 690 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 541 - -
Car07g02353 690 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 567 689 - -
Car07g02353 690 Pfam Ion transport protein 59 305 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car07g02353 690 SMART cnmp_10 376 493 IPR000595 -
Car07g02353 690 Gene3D - 59 300 - -
Car07g02353 690 PRINTS EAG/ELK/ERG potassium channel family signature 71 78 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g02353 690 PRINTS EAG/ELK/ERG potassium channel family signature 94 104 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g02353 690 PRINTS EAG/ELK/ERG potassium channel family signature 246 263 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g02353 690 PRINTS EAG/ELK/ERG potassium channel family signature 272 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g02353 690 PRINTS EAG/ELK/ERG potassium channel family signature 290 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g02353 690 SUPERFAMILY cAMP-binding domain-like 303 496 IPR018490 -
Car07g02353 690 ProSiteProfiles KHA domain profile. 618 690 IPR021789 -
Car07g02353 690 PANTHER POTASSIUM CHANNEL AKT1 1 541 IPR045319 GO:0005249|GO:0006813
Car07g02353 690 PANTHER POTASSIUM CHANNEL AKT1 567 689 IPR045319 GO:0005249|GO:0006813
Car07g02353 690 Pfam Cyclic nucleotide-binding domain 396 479 IPR000595 -
Car07g02353 690 ProSiteProfiles cAMP/cGMP binding motif profile. 376 495 IPR000595 -
Car07g02353 690 SUPERFAMILY Voltage-gated potassium channels 53 299 - -
Car07g02353 690 Gene3D Jelly Rolls 344 502 IPR014710 -
Car07g02353 690 CDD CAP_ED 376 489 IPR000595 -
Car07g02353 690 Pfam KHA, dimerisation domain of potassium ion channel 625 686 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02353 Car-Chr7 41378429 41384647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02353 1 689 Ion Channels AT5G46240 60.085 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02353 K21867 - gmx:100800340 1035.4