Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02344 ATGGCTGGGCAATCGGACCATGAGCTCTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATCGCTGAGGACGAGATTGTGGACATCGTGCCAAATCTCAAAATGGATCCACTCTGTCTCATCTCTGGAGATTTTGGCCCATTTACGCCACAAATTGTTACTCAAGTACCGCTTTGGTTGGCCATTGCTCTCAAGAAGAGAGGCAAGTGTTCCATTTGCCCTCCCCAATGGATGACTGTTGAGAAGTTGACTCAAGTGTTGGAGGTAGAGCGAGACTCTCAAGAGATGTCGGAACATTTGCCATTTCATTATGTAGAAATCTCAAGACTTCTTTTTGACCATGCACGTGACAACATCCCCGATGCATACATGGTGAGGTCTCTAATTGAGGACATCAGAGATGTAAGGTTTCATAAAGTTGAAACTGACTTGGAGGGATTCAATGGTCGTACAATAGCTGTGAAGATAAAAAATTTATCTGCAATGGAAGTGAACATTGTTCGCCCATTTATTGGAAGAGCTTTACAAGCATTCTACAAGCATGATAGTTCAGAGTTGATCCCAGACCCAGAGCGAGCTCCTGATAGACGGCCGCAAGTTGCCCACAATGCCCCAAGAAGGCAACTACGAAGATAA 633 0.4502 MAGQSDHELSLFSAEELEFIAEDEIVDIVPNLKMDPLCLISGDFGPFTPQIVTQVPLWLAIALKKRGKCSICPPQWMTVEKLTQVLEVERDSQEMSEHLPFHYVEISRLLFDHARDNIPDAYMVRSLIEDIRDVRFHKVETDLEGFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSSELIPDPERAPDRRPQVAHNAPRRQLRR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02344 210 PIRSF GINS_PSF2 2 210 IPR007257 GO:0005634|GO:0006260
Car07g02344 210 MobiDBLite consensus disorder prediction 185 201 - -
Car07g02344 210 SUPERFAMILY GINS helical bundle-like 73 182 IPR036224 -
Car07g02344 210 CDD GINS_A_psf2 66 184 - -
Car07g02344 210 Gene3D - 12 77 - -
Car07g02344 210 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 192 IPR007257 GO:0005634|GO:0006260
Car07g02344 210 Pfam GINS complex protein 53 162 IPR021151 -
Car07g02344 210 Gene3D - 78 186 - -
Car07g02344 210 SUPERFAMILY PriA/YqbF domain 12 71 - -
Car07g02344 210 MobiDBLite consensus disorder prediction 185 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02344 Car-Chr7 41036613 41039535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02344 1 146 Core DNA Replication Machinery Family AT3G12530 67.808 3.62e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02344 K10733 - gmx:100780528 376.326