Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02326 ATGGAGCCACCACAATATTATAGAACAGAAGAGGAAATTGAAGAAAATATGACAGCCTTTGACATGATTCACGGTGGTAATCAGTTTATGTCAAGCATGTTGGCCCGGACACGATTCAACAATCAACGTATGCAGTCTTATGATGGTCACTTTATTTTCGATGAAAATAATACCAATGAGATCCACGTTGTTCATACAAGAACAATACAAAATATAGACACTACTCAAATACAAAGACAATTTGATGACAACTTTGAAACAATTATAATTGAAGAAAATTTTGAAGATATGATATGTTGTATCTGTCTGGTAGAGTTTTCGGTTGGATCTGAGGCTGTTCAATTGCCTGATCCATGTCTGCATATATATCATCAAGATTGTATCATGAAGTGGTTAGATAGATGTAACACATGTCCTATGTGTCGTAGAGAAGTTTATTAA 441 0.3447 MEPPQYYRTEEEIEENMTAFDMIHGGNQFMSSMLARTRFNNQRMQSYDGHFIFDENNTNEIHVVHTRTIQNIDTTQIQRQFDDNFETIIIEENFEDMICCICLVEFSVGSEAVQLPDPCLHIYHQDCIMKWLDRCNTCPMCRREVY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02326 146 PANTHER OS09G0446500 PROTEIN 85 145 - -
Car07g02326 146 SMART ringv_2 98 142 IPR011016 GO:0008270
Car07g02326 146 ProSiteProfiles Zinc finger RING-type profile. 99 142 IPR001841 -
Car07g02326 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 146 IPR013083 -
Car07g02326 146 Pfam Ring finger domain 99 142 IPR001841 -
Car07g02326 146 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 85 145 - -
Car07g02326 146 SUPERFAMILY RING/U-box 92 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02326 Car-Chr7 39736927 39737367 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02326 84 145 C3H Transcription Factor Family AT5G01980 43.750 2.77e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02326 - K19039 cam:101490108 94.7449