Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02302 ATGGCCTTGCTATGTGCTtcaccatcatcactcatgttcccttcatcatcttcattccctcatcaCAAGAATTGTTTAACAACTAAAACATCCCAATTCCCACTTCTATCCCTTTCATTAtcttcttcttcttcttattcAATTCGTACCCATTTCCCTCCATCTTTCCTTGTCCATTCTCAGCAAGACTCTTCCTTCGTCGCAGAACAAGATCCACGATTCATCTGTGTTGAACCTGAACCCCGTTTTAAAGGCCCGGACATTTGGAACACGACATGGTATCCAAAAGCTTCGGATCATGTCAATACAGAGAAAACATGGTACATTGTTGATGCTACAGATAAAGTTCTTGGAAGACTAGCATCAACAATTGCTAATCACATTCGAGGGAAAAATCTGGTGACCTATACACCCAGTGTGGACATGGGTGCTTTTGTAATTGTGATAAATGCAGAAAAGGTTGCTGTAAGCGGGAAAAAGAGAACCCAAAAGCTTTATCGGAGGCACTCAGGTCGACCTGGTGGTATGACAGTTGAGACATTTGACCAGCTGCAGAACAGAATTCCTGAAAGAATTATTGAACATGCTGTTCGAGGCATGCTTCCAAAAGGGAGGCTTGGCAGGAGTCTATTCACACGCCTGAAGGTTTATAGCGGCCCAGATCATCCGCATGAGGCGCAGAAGCCGGTCGACTTGCCCATAAGGGATAAGAGGATACAGTTGCAGAGATAA 732 0.4044 MALLCASPSSLMFPSSSSFPHHKNCLTTKTSQFPLLSLSLSSSSSYSIRTHFPPSFLVHSQQDSSFVAEQDPRFICVEPEPRFKGPDIWNTTWYPKASDHVNTEKTWYIVDATDKVLGRLASTIANHIRGKNLVTYTPSVDMGAFVIVINAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQNRIPERIIEHAVRGMLPKGRLGRSLFTRLKVYSGPDHPHEAQKPVDLPIRDKRIQLQR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02302 243 CDD Ribosomal_L13 107 220 IPR005822 GO:0003735|GO:0005840|GO:0006412
Car07g02302 243 ProSitePatterns Ribosomal protein L13 signature. 197 219 IPR023563 GO:0003735|GO:0005840|GO:0006412
Car07g02302 243 Pfam Ribosomal protein L13 105 223 IPR005822 GO:0003735|GO:0005840|GO:0006412
Car07g02302 243 PANTHER RIBOSOMAL PROTEIN L13 65 243 IPR005822 GO:0003735|GO:0005840|GO:0006412
Car07g02302 243 SUPERFAMILY Ribosomal protein L13 102 234 IPR036899 GO:0003735|GO:0005840|GO:0006412
Car07g02302 243 Hamap 50S ribosomal protein L13 [rplM]. 107 242 IPR005822 GO:0003735|GO:0005840|GO:0006412
Car07g02302 243 Gene3D Ribosomal protein L13 96 239 IPR036899 GO:0003735|GO:0005840|GO:0006412
Car07g02302 243 TIGRFAM rplM_bact: ribosomal protein uL13 101 232 IPR005823 GO:0003735|GO:0005840|GO:0006412
Car07g02302 243 PANTHER BNAA02G18970D PROTEIN 65 243 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02302 109 242 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 31.111 2.15e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02302 K02871 - gmx:100305981 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02302 07 36467456 36471144 Car07g02302 07 36467456 36471144 ECH