Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02296 ATGTGTTATGGATATAATAATGATAAAGGGTGTCAAAAATGGGAGGATATACCAACTTGTAGAGTACCTGGTGAAGTGTTTCAAAAAAAGAAGGGTAGTACTCGTTATCAAAATATAACCTATGAAAAGAATGTTACTTATGGGTACAATGATTGCAGGGCTATTTGTTGGAGAAATTGTTCTTGCACCGGATTTGAAGAATTTTATATTAATAAAACAGGATGTACGTTCTATTTTGGAAATTCAACACAAGATGTTTATTTAGAGAATGATGAACACTTTTACATCTTGGTTCGTGCAAAGATATCCCCCCATGGTAAAATAAAGTGGGTATGGATATCTGCAATAATAGCAGCAACTTTACTTGTGACTTTCCTATCCATTTTAATTTTAGCCATAACGAAAAAAAAATACAGGCTTAAAGAGAAGGAAAGAAAAAGAATGGTAACAGAGATGCAAAATTTGGAAGTTACTAATGAATCATATGCTCTTAAAGATCTTGAAGATGATTTAAAGGAACATAATATAAAAGTATTCAACTACACATCAGTTTTAGCGGCAACTATGAGCTATACACCTGAAAACAAGTTAGGAGAAGGTGGCTATGGACCTGTTTATAAGGGATTCCTCTCATCAGGGCAAGAAGTTGCTATCAAAAGACTTTCAAAAACTTCTAGACAAGGAATTGAGGAATTCAAAAATGAACTAAAATTGATAAGTGAACTTCAGCACAAGAATCTTGTACAACTACTTGGCTGTTGCATTCATAAAGACGAGAGGATTCTAATTTATGAATATATGTCAAACAAGAGCTTGGATTTCTATCTATTTGATTATACAAGAAGGAAGCTCTTAGATTGGAAAAAGCGCTTCCACATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCATAAGTATTCAAGACTCAAAATTATTCACAGGGACTTAAAGGCTAGCAACATACTTCTTGACGAAAACATGAATCCAAAAATTTCTGATTTTGGAATGGCTAGAATGTTCACAGAATATGAATCAATTGTAAATACTAACAGAGTTGTTGGGACGTATGGATACATGTCACCAGAATATGCTATGGAAAGAATTTGCTCTACAAAGTCAGATGTATATAGTTTTGGAGTGTTGTTACTTGAAATTATTTGTGGAAGAAGAAACAATAGCTTATATGATGCTGACCGCCCACTAAATCTTATAGGATATGCATGGGAACTATGGAATGATGGTGAGTGTCTAAAGTTAATGGATCCGTCATTAAGTGACACATTTATTTCTGATGAAGTGCAAAGGTGCATCCATGTTGGTCTCTTATGTGTTGAACAATATGCAAATGATCGACCTCCCATGTCTGATGTTGTATCTATGTTAACAAATAAAAGTACATATTTTACTTTACCAAGAAGACCAGCATTCTATGTTGGAAGAGAAATTCTAGAGAGCTCAACAACTTCAAAAGTTCCTAACAGCTATTCTATAAATGAAACTTTTACATCCTCTGAAGGAGCATAA 1527 0.336 MCYGYNNDKGCQKWEDIPTCRVPGEVFQKKKGSTRYQNITYEKNVTYGYNDCRAICWRNCSCTGFEEFYINKTGCTFYFGNSTQDVYLENDEHFYILVRAKISPHGKIKWVWISAIIAATLLVTFLSILILAITKKKYRLKEKERKRMVTEMQNLEVTNESYALKDLEDDLKEHNIKVFNYTSVLAATMSYTPENKLGEGGYGPVYKGFLSSGQEVAIKRLSKTSRQGIEEFKNELKLISELQHKNLVQLLGCCIHKDERILIYEYMSNKSLDFYLFDYTRRKLLDWKKRFHIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARMFTEYESIVNTNRVVGTYGYMSPEYAMERICSTKSDVYSFGVLLLEIICGRRNNSLYDADRPLNLIGYAWELWNDGECLKLMDPSLSDTFISDEVQRCIHVGLLCVEQYANDRPPMSDVVSMLTNKSTYFTLPRRPAFYVGREILESSTTSKVPNSYSINETFTSSEGA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02296 508 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 489 - -
Car07g02296 508 Gene3D Phosphorylase Kinase; domain 1 142 266 - -
Car07g02296 508 Gene3D Transferase(Phosphotransferase) domain 1 267 470 - -
Car07g02296 508 CDD STKc_IRAK 197 464 - -
Car07g02296 508 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 489 - -
Car07g02296 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Car07g02296 508 Coils Coil 138 158 - -
Car07g02296 508 Pfam Protein tyrosine and serine/threonine kinase 194 460 IPR001245 GO:0004672|GO:0006468
Car07g02296 508 ProSiteProfiles Protein kinase domain profile. 191 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02296 508 SUPERFAMILY Protein kinase-like (PK-like) 176 482 IPR011009 -
Car07g02296 508 SMART serkin_6 191 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02296 Car-Chr7 36054397 36063905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02296 160 478 Receptor kinase-like Gene Family AT3G45860 54.206 1.43e-121 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g02296 PK_Tyr_Ser-Thr 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02296 - - vun:114168194 640.188