Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02292 ATGAATCCAAAAATTTCTGATTTTGGTATGGCTAGAATGTTTGCAGAATATGAATCAACTGCAAACACCAACAGAATTGTTGGGACGTGTGGATACATGTCACCTGAATATGTTATGGAAGGAATTTGTTCTACAAAGTCAGATGTATATAGCTTTGGAGTGTTGTTACTTGAAATTATTTGTGGAAGAAGAAACAATAGCTTCTATGATGCTGACCGCCCACTAAATCTTATAGGATATGCATGGGAGCTATGGAATGATGGTCAATGTCTAAAGTTAATGGATTCGTCATTAAGTGACACATTTATTTCTGATGAAGTGCAAAGGTGCATTCATGTTGGTCTCTTATGTGTTGAACAATATGCAAATGACCGACCTCCCATGTCTGATGTTGTAACTATGTTAACAAACAAAAGTGCACATTTTACTTTACCAAGAAGACCAGCATTCTATGTAGAAAGAGACATTCTAGACGGTGCAACAACTTCAAATGTTCCTAACACCTATTCTACAAATGAAACTTTTACATCCTCCGATGGAGCTTAA 546 0.3626 MNPKISDFGMARMFAEYESTANTNRIVGTCGYMSPEYVMEGICSTKSDVYSFGVLLLEIICGRRNNSFYDADRPLNLIGYAWELWNDGQCLKLMDSSLSDTFISDEVQRCIHVGLLCVEQYANDRPPMSDVVTMLTNKSAHFTLPRRPAFYVERDILDGATTSNVPNTYSTNETFTSSDGA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02292 181 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 171 - -
Car07g02292 181 SUPERFAMILY Protein kinase-like (PK-like) 2 162 IPR011009 -
Car07g02292 181 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 171 - -
Car07g02292 181 Gene3D Transferase(Phosphotransferase) domain 1 1 145 - -
Car07g02292 181 Pfam Protein tyrosine and serine/threonine kinase 4 134 IPR001245 GO:0004672|GO:0006468
Car07g02292 181 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02292 Car-Chr7 35880718 35881626 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02292 1 151 Receptor kinase-like Gene Family AT3G45860 54.902 9.14e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g02292 PK_Tyr_Ser-Thr 2.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02292 - - cam:101506368 375.941