Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02260 aTGACTGGAATAGGAAAGGGCAAGATTACAGCAATAGATGGTGTTATTCTTCCTACATTTGGACTCTTGCTTTCATCAGCTATTAATACATTCTATAAACCTCCTGAGGAACTTAGAAAAGATTATGAGTTTTGGTCACTTTTAATTTTTGGTTTGGGTTGTATTACCCTTGTGGCTATACCAATGCAGAACTACTTATTTGGGATTGCTGGTGGAAAACTTATAGAAAGAATTCGTTCATTGACATTTCAAAAGGTTGTGCACCAAGAAATCAGTTGGTTTGATCATTCTTCAAATTCAAGTGGTGCAGTTAGTGCAAGGTTATCTACTGATGCTTCAACTGTGAGAACTCTTGTTGGTGATACATTGGCCCTCATTGTGCAAAACATAGCAACAGTCGCAGCAGGACTAGCTATAGCATTTAGTGCTAATTGGATCCTATCTTTTGTGATTCTAGCTGTGTCACCCTTGTTGCTCATACAAGGATACATTCAAACCAAGTTTCTCAAAGGATTCAGTTCTGATGCAAAGGTGAAGTATGAAGAGGCAAGTCAAATAGCAAATGATGTTGTTGGTAGCATCAGAACAGTTGCATCATTTTGTGCTGAACAAAAGGTGATGGATATGTATCAGAAGAAATGTTCAGCACCAGAAAAACAAGGTGTTAGGTTGGGACTTGTTAGTGGTATATGA 693 0.3795 MTGIGKGKITAIDGVILPTFGLLLSSAINTFYKPPEELRKDYEFWSLLIFGLGCITLVAIPMQNYLFGIAGGKLIERIRSLTFQKVVHQEISWFDHSSNSSGAVSARLSTDASTVRTLVGDTLALIVQNIATVAAGLAIAFSANWILSFVILAVSPLLLIQGYIQTKFLKGFSSDAKVKYEEASQIANDVVGSIRTVASFCAEQKVMDMYQKKCSAPEKQGVRLGLVSGI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02260 230 SUPERFAMILY ABC transporter transmembrane region 11 229 IPR036640 GO:0005524|GO:0016021
Car07g02260 230 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 10 230 IPR039421 -
Car07g02260 230 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 10 230 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g02260 230 Pfam ABC transporter transmembrane region 11 230 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g02260 230 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 10 230 - -
Car07g02260 230 CDD ABC_6TM_Pgp_ABCB1_D2_like 11 230 - -
Car07g02260 230 Gene3D ABC transporter type 1, transmembrane domain 9 230 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02260 Car-Chr7 34544390 34545573 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02260 4 230 Calmodulin-binding Proteins AT2G36910 25.541 9.57e-17 77.0