Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02245 ATGCCAGGGAATACATACAATGGTGATTCAAATCATATACCGGGGCGTGTAGAAAGGCTATTAAGAGAGAGAGAACTGAGGAAAAGTGGAAGAGAAAACAATGGAAGTGAAGTTGTATATTTGGAGAAGGAGGAGAAGAATAATGTATCATCATTATTAAGAAGTGGTGAGAGGCAAGAAGATGTTGTTGGAAAAGGAGAAGGTTGTTATAATAGCAATAATAATAATAGACAGAGGCTTTTGGTTGTTGCAAATAGGTTGCCCGTGTCGGCAATTAGGAAAGGTGAAGATTCGTGGTCTTTGGAGATTAGCGCAGGTGGCCTCGTAAGTGCTCTCTTAGGGGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCTGGTGTGAATGTTCCAGATGAGATTGGACAGAAGGCACTCACTGTAGCATTAGCCGAAAAGAGGTGTATACCAGTATTTCTAGATGAAGATATTGTTCATCAATATTACAATGGCTATTGCAACAACATCTTGTGGCCCCTTTTCCACTACCTTGGACTTCCACAAGAAGACCGTCTTGCTACAACACGTAGTTTTCAGTCACAGTTTTTGGCCTATGAGAAAGCAAATCAAATGTTTGCTGATGTAGTAAACCAACACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCAAAATGCTTAAAGAAATATAACACCAAAATGAAAGTTGGCTGGTTTCTCCACACCCCATTTCCTTCTTCTGAAATTCATAGGACTCTGCCGTCTCGTTCCGAGCTCTTGCATTCGGTTCTTGCAGctgatttagttggTTTTCACACCTATGATTATGCAAGACATTTTGTTAGTGCCTGTACTCGCATCCTTGGACTTGAAGGTACACCTTATGGGGTTGAGTATCAAGGGAAGCTAACTCGAGTTGCCGCATTTCCAATTGGTATAGACTCGGAACGATTTATACGGGCACTGGACCTTCCTCCAGTGCAGGATCATATCAAAGAATTGCAAGAAAGATTCAAAGGCAGAAAGGTGATGTTAGGTGTTGATCGTCTTGATATGATTAAAGGAATTCCTCAGAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAAAATGCTTATTGGCGCGACAAAGTAGTATTGCTTCAAATCGCCGTCCCAACAAGAACCGATGTTCCTGAATATCAAAAGCTTACAAGTCAGGTTCATGAAATTGTTGGTCGCATCAATGGTAGATTTGGATCATTGACTACTGTTCCTATACATCACCTGGATCGTTCTCTTGACTTTCATGAACTATGTGCTTTGTATGCAGTTACTGATGTAGCGCTAGTCACATCTTTAAGAGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCGTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCCCAGTCTCTTGGTGCTGGGGCGATTCTTGTCAACCCCTGGAATGTTACAGAAGTTGCTACTGCAATTGCCAGGGCTTTGAATATGCTACCTGCGGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTCAAATCCCACACTGCACAAGAATGGGCAGGAACTTTTGTAAGCGAACTAAATGATACTGTTATTGAGGCACAACTAAGAACAAGACAAGTTCCACCTCCGCTTCCAACGGAGATTGCGGTTAATCGTTATTTGCAGTCAACTAATCGATTGCTCATTTTGGGATTCAATGGAACTTTAACTGAACCAGTTGAGAAAACAGGTGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAAAATTGAGACAACCATTAAAAGCACTTTGCAGTGATCCAAATACCACAGTAGTTGTGCTTAGTGGAAGTGGTAGAAAAGTCCTAGATGATAACTTCAAAGAATATGACATGTGGTTGGCAGCAGAAAATGGAATGTTTTTACACCCTTCAAAGGGTGAATGGATGACAACAATGCCGGAGCATCTGAATATGGAATGGGTGGACAGTGTGAAGCATGTTTTTGAGTACTTCACGGAAAGAACACCTCGTTCACATTTTGATTTTGAAGAGAGGGAAACTTCACTTTTATGGAATTACAAATATGCAGCAGATGTTGAGTTTGGAAAACTTCAAGCAAGAGATATGCTGCAACATCTCTGGACAGGTCCGATTTCTAATTCGTCGGTTGAAGTTGTTCAAGGGAGTCGATCTGTTGAGGTTAGAGCTGTTGGTGTTACAAAGGGAGCAGCTATTGACCGAATCCTGGGTGAGATAGTTCATAGTAAATCCATGACATCGCCAATTGATTACGTTCTTTGTATAGGACATTTTCTTGGGAAGGATGAAGATCTGTATACTTTTTTTGAGCCAGATCTTCCATATATTGGTGTGGGTCTTCCAAGAAGTAAGGTAACAACAGAAGCAGTAAAGTTTCCTGTCGAGAAGAAACCGATTATGAAGACCCCTTCAGCTAGTAGTAAAAATGGACCTAAATCATCTCAAAATAAGGCGCAGAAGCCGGTCTCAAATTCTGCTCCAGAAAAAGAATCATGGAACGTTCTTGATCTTAAGAAAGATAATTACTTCTCATGTGCTGTTGGCCGAACTCGAACAAATGCTCGGTATGTAGAAGGAGGGCTATTCGTCAGATGA 2670 0.4079 MPGNTYNGDSNHIPGRVERLLRERELRKSGRENNGSEVVYLEKEEKNNVSSLLRSGERQEDVVGKGEGCYNSNNNNRQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTVALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFLAYEKANQMFADVVNQHYEEGDVVWCHDYHLMFLPKCLKKYNTKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLPPVQDHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVATAIARALNMLPAEREKRHKHNFLHVKSHTAQEWAGTFVSELNDTVIEAQLRTRQVPPPLPTEIAVNRYLQSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPKLRQPLKALCSDPNTTVVVLSGSGRKVLDDNFKEYDMWLAAENGMFLHPSKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLLWNYKYAADVEFGKLQARDMLQHLWTGPISNSSVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDLYTFFEPDLPYIGVGLPRSKVTTEAVKFPVEKKPIMKTPSASSKNGPKSSQNKAQKPVSNSAPEKESWNVLDLKKDNYFSCAVGRTRTNARYVEGGLFVR 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02245 889 Gene3D Glycogen Phosphorylase B; 70 325 - -
Car07g02245 889 CDD GT20_TPS 79 544 IPR001830 GO:0003824|GO:0005992
Car07g02245 889 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 54 882 - -
Car07g02245 889 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 54 882 IPR001830 GO:0003824|GO:0005992
Car07g02245 889 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 78 546 - -
Car07g02245 889 MobiDBLite consensus disorder prediction 827 855 - -
Car07g02245 889 Gene3D - 666 749 - -
Car07g02245 889 Pfam Glycosyltransferase family 20 79 544 IPR001830 GO:0003824|GO:0005992
Car07g02245 889 Gene3D - 579 763 IPR023214 -
Car07g02245 889 MobiDBLite consensus disorder prediction 825 855 - -
Car07g02245 889 CDD HAD_TPP 577 811 - -
Car07g02245 889 Gene3D Glycogen Phosphorylase B; 326 529 - -
Car07g02245 889 Pfam Trehalose-phosphatase 582 823 IPR003337 GO:0003824|GO:0005992
Car07g02245 889 SUPERFAMILY HAD-like 576 765 IPR036412 -
Car07g02245 889 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 79 544 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02245 Car-Chr7 33248957 33291091 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02245 1 884 Trehalose Biosynthesis Gene Families AT1G78580 75.322 0.0 1408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02245 K16055 - gmx:100797320 1555.04