Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02241 ATGACTGGAATAGGAAAGGGCAAGATTACAGtgattggtttcgttcctgtttTACTACTTGGATCAATTGCTGCAAAAATACATGGTGTTATTCTTCCTACATTTGGACTCTTGCTTTCATCAGCTATTAATACATTCTACAAACCTCCTGAGGAACTTAGAAAAGATTCTGAGTTTTGGTCACTTTTAATTTTTGGTTTGGGTTGTATCACCCTTGTAGCTATACCAATGCAGAACTACTTATTTGGGATTGCTGGTGGAAAACTTATAGAAAGAATTCGTTCATTGACATTTCAAAAGGTTGTGCACCAAGAAATCAGTTGGTTTGATCATTCTTCAAATTCAAGTGGTGCAGTTAGTGCAAGGTTATCTACTGATGCTTCAACTGTGAGAACTCTTGTTGGTGATACATTTGCCCTCATTGTGCAAAACATAGCAGCAGTCACAGCAGGACTAGTTATAGCATTTAGTGCTAATTGGATCCTATCTTTTGTGATTCTAGCTGTGTCACCCTTGTTGCTCGTACAAGGATACATTCAAACCAAGTTTCTCAAAGGATTCAGTTCTGATGCAAAGGTGAAGTATGAAGAGGCAAGTCAAATAGCAAATGATGTTGTTGGTAGCATCAGAACAGTTGCATCATTTTGTGCTGAACAAAAGGTGATGGATATGTATCAGAAGAAATGTTCAGCACCATAA 699 0.3662 MTGIGKGKITVIGFVPVLLLGSIAAKIHGVILPTFGLLLSSAINTFYKPPEELRKDSEFWSLLIFGLGCITLVAIPMQNYLFGIAGGKLIERIRSLTFQKVVHQEISWFDHSSNSSGAVSARLSTDASTVRTLVGDTFALIVQNIAAVTAGLVIAFSANWILSFVILAVSPLLLVQGYIQTKFLKGFSSDAKVKYEEASQIANDVVGSIRTVASFCAEQKVMDMYQKKCSAP 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02241 232 Gene3D ABC transporter type 1, transmembrane domain 11 232 IPR036640 GO:0005524|GO:0016021
Car07g02241 232 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 15 232 - -
Car07g02241 232 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 27 232 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g02241 232 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 15 232 IPR039421 -
Car07g02241 232 SUPERFAMILY ABC transporter transmembrane region 15 228 IPR036640 GO:0005524|GO:0016021
Car07g02241 232 CDD ABC_6TM_Pgp_ABCB1_D2_like 16 232 - -
Car07g02241 232 Pfam ABC transporter transmembrane region 19 228 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02241 Car-Chr7 32955598 32956741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02241 19 232 Calmodulin-binding Proteins AT2G36910 32.093 2.26e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02241 K05658 - gmx:100792531 365.925