Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02228 ATGCTTTATATGGGTTTTCTCAACAGTGGGTTCATTGGGGTTAGGGAGCTGGGTTTCTCGTTCGAGCTGCTTCGCTCATCAGCATCCCAAAGTCCTTCTCCGTCGAGCTGCTTCTCTCGCTCCTCCGCATCCCAAAGCCCTTCTTCCCTTCTTCTTGTCCGAACCCTCCGCATCCCTGCTTCGCTCCGCCGTGATGATCGCTCTCTCTTAAGACAATCTTTTGCTTACAGCAAATCAGGAGTCTGTAAAACTTGCAGATTTCGGTCTTGCAAGAGAAGATCAGTGACTGAGATGATGACTGCCGAAACAGGAACTTACCGATGGATGGCACCAGAGTTGTACAGTACCGTAACATTGCGCCAGGGAGAGAAAAAGTACTATAACAACAAGGTTGATGTGTATAGCTTTGGGATTGTTTTGTGGGAGATACTAACAAATCACATGCCTTTTGAAGGAATGTCTAATTTACAAGCTGCTTATGTTGCTGCCTTCAAGCAAGAGAGGCCGAGAATTCCAGATGACATATCCCCCGATCTTGCTTTCGTCATACAATCATGCTGGAAATCGAGTCTTACTGAAAAAGCCCCAATTTGTATTGAAAACCCTAACTTGGTTGCTGTTCATGGTGTTTTGGACATCACAACAACAGAGGTAGCAGACTACATAGTTGGAGGCGTAATGGCTTGTGACAGTTCTCGCTTTGATGTTATAATAGAGAAGAAAATCCCCCTGGTCCTGAGTGTGGGAGCATTAGACATGGTTAACTTTGGAGCAAAAGATACCATACCACAGAATTTCCAGCAGAGAAATATATACGAACACAATAATCAGGTTTCACTCATGCGAACAACAGTGGATGAGAACAGAAAATTTGCTGATTTCATAGCAAATAAACTGAACAGTTCATCTTCTAAGATTTGTGTTTGCCTTCCAGAAAAAGGTATATCTGCTTTAGATGCACCAGGTAATCCTTTTTATGATCCAGAGGCAACTGATACTCTTCTCCACGAATTACAAAGGCTTATTCAGACTGATGATAATCGACAGGTAAAGGTGTATCCCCATCATATTAATGACCTTGAATTTGCAAATGCACTAGTTGATGCTTTTTTAGTGGTTAATGAACAAACTGGTAAAGATTCTACTCCTCCACCAGTAGCCATTCCTGAGTCTGTTGAACACTTCCATGAGGATTCTGTTTCAAATACATCAAGCTTTGGGACAATTTTCTATACACCTAGAGAATTCCCAGATGCAAAACCAGGTTCTCATTTCATTTAG 1281 0.4231 MLYMGFLNSGFIGVRELGFSFELLRSSASQSPSPSSCFSRSSASQSPSSLLLVRTLRIPASLRRDDRSLLRQSFAYSKSGVCKTCRFRSCKRRSVTEMMTAETGTYRWMAPELYSTVTLRQGEKKYYNNKVDVYSFGIVLWEILTNHMPFEGMSNLQAAYVAAFKQERPRIPDDISPDLAFVIQSCWKSSLTEKAPICIENPNLVAVHGVLDITTTEVADYIVGGVMACDSSRFDVIIEKKIPLVLSVGALDMVNFGAKDTIPQNFQQRNIYEHNNQVSLMRTTVDENRKFADFIANKLNSSSSKICVCLPEKGISALDAPGNPFYDPEATDTLLHELQRLIQTDDNRQVKVYPHHINDLEFANALVDAFLVVNEQTGKDSTPPPVAIPESVEHFHEDSVSNTSSFGTIFYTPREFPDAKPGSHFI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02228 426 Pfam Protein tyrosine and serine/threonine kinase 88 193 IPR001245 GO:0004672|GO:0006468
Car07g02228 426 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g02228 426 Gene3D Uncharacterised protein family UPF0261, NC domain 203 376 - -
Car07g02228 426 Gene3D Transferase(Phosphotransferase) domain 1 47 197 - -
Car07g02228 426 PANTHER UPF0261 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G10120) 207 382 - -
Car07g02228 426 SUPERFAMILY Protein kinase-like (PK-like) 77 192 IPR011009 -
Car07g02228 426 Pfam Uncharacterised protein family (UPF0261) 207 371 IPR044122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02228 Car-Chr7 32530181 32535556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02228 82 204 MAP Kinase Kinase Kinase AT5G01850 71.545 2.93e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car07g02228 UPF0261 1.2e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02228 - - lja:Lj4g3v0985590.2 363.229