Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02218 ATGGGAGAaacaacacaagacaacaacaacacaggaggagcaggaacagcaacaaccacGTCGAAGAGAATCGGAGGAGGAGAAATCGTGGAAGTACAAGGAGGTCACATTGTCCGTTCAACAGGACGGAAGGACCGTCACAGCAAAGTTTGCACAGCGAAAGGACCCCGGGACCGCCGAGTACGACTATCGGCCCACACCGCTATCCAATTCTACGACGTCCAGGACCGTTTGGGCTACGACCGACCCAGTAAGGCAGTTGATTGGCTCATCAAAAAAGCCAAAGCTTCAATTGACGAACTCGCTCAGCTTCCCGCATGGAACCCCACCGCCACGACGCCGCCATCTTCAACACCACAACAACATCATCAACATACAGATGAAATGTTCCACCGGCAATCCCCGGTGCACGATGACCCAGTGACCGGATCCACTAGCCGTAGAGCAGCGGCATTGGAGCGAAGAATACCACAACAATTTTCTTCGCaacaattagaattagaagataataataataataacaataataataGCGGGAAACATAAATACAGCAATGCTTCTACTTCCGGTTTTCTTCAAGGGTCATTGGACACTGACATTGCGGATACTATTAAATCGTTTTTTCCAGTGGATACGGCTACGACGTCGTTTCACAGTTACCCACCGCCGCCATCGGATTTGCTTTCTCGAACGCCAACCACTCAGCAAGATCTGCGTCTCTCGTTGCAATCTTTTCAGGATCCTATTATGCTTAACCATCAGGCACAGAACCATCACGTGCTTTTCGCCGGAGCTTCTTCGCTCGGCTTCGACGGCGGTGGATGGCCTGAGCAGCAGCATCATGAAGAACATGACCATGGCAGATTGCATAGAATGATGGCTTGGAATGCTAATGCTGTTGATGGCGGTAACAGTGGCCATGGCGGTGGATTTGTCTTCACCGCTCCGACGCCGGCGTTCGGCGGTCACGCTCAGTTTTTTACTCAGAGGGGACCCCTTCAGTCCAGTAACACACCTTCATTTCGTGCTTGGATAGATCCGTCCATGGCGACGGCGACTATTGCCGATCACCACAACCATCACTACCTTTCGCCAATGATCCATCAGGCTTCTGTCTCCGGTGGTGGATTCTCCATACCAGCACGAATTCAGGGTGAAGAGGAACACGACGGTGTATCCGAAAAACCGTCCTCTGCTTCCTCTGATTCTCGCCATTGA 1218 0.4819 MGETTQDNNNTGGAGTATTTSKRIGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDELAQLPAWNPTATTPPSSTPQQHHQHTDEMFHRQSPVHDDPVTGSTSRRAAALERRIPQQFSSQQLELEDNNNNNNNNSGKHKYSNASTSGFLQGSLDTDIADTIKSFFPVDTATTSFHSYPPPPSDLLSRTPTTQQDLRLSLQSFQDPIMLNHQAQNHHVLFAGASSLGFDGGGWPEQQHHEEHDHGRLHRMMAWNANAVDGGNSGHGGGFVFTAPTPAFGGHAQFFTQRGPLQSSNTPSFRAWIDPSMATATIADHHNHHYLSPMIHQASVSGGGFSIPARIQGEEEHDGVSEKPSSASSDSRH 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02218 405 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 10 405 IPR005333 GO:0003700
Car07g02218 405 MobiDBLite consensus disorder prediction 107 148 - -
Car07g02218 405 MobiDBLite consensus disorder prediction 375 405 - -
Car07g02218 405 MobiDBLite consensus disorder prediction 160 186 - -
Car07g02218 405 Pfam TCP family transcription factor 42 183 IPR017887 -
Car07g02218 405 MobiDBLite consensus disorder prediction 1 28 - -
Car07g02218 405 MobiDBLite consensus disorder prediction 1 23 - -
Car07g02218 405 MobiDBLite consensus disorder prediction 383 405 - -
Car07g02218 405 ProSiteProfiles TCP domain profile. 43 101 IPR017887 -
Car07g02218 405 MobiDBLite consensus disorder prediction 107 123 - -
Car07g02218 405 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 10 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02218 Car-Chr7 32054048 32056894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02218 25 405 TCP Transcription Factor Family AT1G53230 47.666 2.49e-95 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car07g02218 TCP 1.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02218 - - mtr:MTR_8g463380 557.37